Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.44□□□□□ -2.34
CDC42EP4Q9H3Q1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR335-201ENST00000362173 94 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 AF228730.3-201ENST00000436691 102 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-504P-201ENST00000516568 104 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU7-53P-201ENST00000516705 60 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 RNA5SP330-201ENST00000517096 96 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR6740-201ENST00000618268 113 ntBASIC0.43□□□□□ -2.34
CDC42EP4Q9H3Q1 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNY3P5-201ENST00000384127 102 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 MT-TT-201ENST00000387460 66 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AL358176.2-201ENST00000425769 204 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AC015818.7-201ENST00000428754 109 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 HMGN1P33-201ENST00000432945 451 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AC087499.7-201ENST00000441958 109 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 SNRPGP8-201ENST00000454064 226 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNA5SP153-201ENST00000516498 76 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR4282-201ENST00000583613 67 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AC020891.4-201ENST00000605745 93 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 SNORA63C-201ENST00000364578 129 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 SNORD38B-201ENST00000384690 67 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR616-201ENST00000385293 97 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 MT-TW-201ENST00000387382 68 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 SNORA26-201ENST00000391286 122 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-602P-201ENST00000411155 105 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU7-96P-201ENST00000459535 64 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-998P-201ENST00000515894 101 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-977P-201ENST00000516411 103 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 RNU6-453P-201ENST00000516819 85 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 MIR4676-201ENST00000583078 72 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 SNORD38B-202ENST00000625943 69 ntBASIC0.41□□□□□ -2.34
CDC42EP4Q9H3Q1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.11-201ENST00000362375 109 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-716P-201ENST00000365621 103 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-945P-201ENST00000383947 107 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR520H-201ENST00000385126 88 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 RNA5SP222-201ENST00000411039 105 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR8062-201ENST00000621515 85 ntBASIC0.4□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORA1.1-201ENST00000364671 133 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.422-201ENST00000384054 114 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORA1-201ENST00000384107 130 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-713P-201ENST00000384761 107 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR563-201ENST00000385080 79 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 SNORD77.3-201ENST00000391113 65 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 AL606845.1-201ENST00000404881 255 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR548I3-201ENST00000408378 149 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR548F4-201ENST00000408515 105 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU2-70P-201ENST00000410718 179 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR18B-201ENST00000454574 71 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU7-56P-201ENST00000458744 62 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU2-11P-201ENST00000459191 187 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 snoU13.2-201ENST00000459201 104 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MTATP8P1-201ENST00000467115 207 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-635P-201ENST00000516651 102 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 AL109933.3-201ENST00000619095 188 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR376A2-201ENST00000636782 80 ntBASIC0.39□□□□□ -2.35
CDC42EP4Q9H3Q1 AC010332.2-201ENST00000613083 1904 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-653P-201ENST00000363074 106 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-472P-201ENST00000384299 107 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 MIR588-201ENST00000384900 83 ntBASIC0.38□□□□□ -2.35
CDC42EP4Q9H3Q1 RNU6-381P-201ENST00000391259 108 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 359.6 ms