Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SNORD115-34-201ENST00000362441 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-12-201ENST00000362583 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 RNU6-235P-201ENST00000362644 107 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-29-201ENST00000362834 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-9-201ENST00000362912 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-21-201ENST00000362963 81 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-14-201ENST00000363090 81 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-13-201ENST00000363358 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-41-201ENST00000363608 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-11-201ENST00000363616 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-5-201ENST00000363633 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-39-201ENST00000363694 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-4-201ENST00000363810 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-16-201ENST00000363887 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-6-201ENST00000363942 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-42-201ENST00000364273 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-15-201ENST00000364809 81 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-1-201ENST00000364961 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-26-201ENST00000365067 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-10-201ENST00000365073 81 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-43-201ENST00000365503 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-36-201ENST00000365629 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 SNORA27-201ENST00000384323 126 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 RPS26P48-201ENST00000491713 339 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 RNU7-181P-201ENST00000517234 74 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 MIR4498-201ENST00000577599 66 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
PKP4Q99569 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
PKP4Q99569 SNORD115-40-201ENST00000606510 82 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 snoU13.31-201ENST00000607291 104 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
PKP4Q99569 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
PKP4Q99569 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.39□□□□□ -2.19
PKP4Q99569 Y_RNA.351-201ENST00000365436 96 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 Y_RNA.454-201ENST00000384224 113 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 RNU7-107P-201ENST00000459121 61 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 SNORD123-201ENST00000459473 70 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 AC107297.1-201ENST00000459991 176 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 Y_RNA.712-201ENST00000517011 92 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 AL359881.1-201ENST00000602916 267 ntBASIC1.39□□□□□ -2.19
PKP4Q99569 RNU1-133P-201ENST00000364867 167 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 SNX2P2-201ENST00000424553 323 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 RNU7-96P-201ENST00000459535 64 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 RNU6-772P-201ENST00000516042 105 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.38□□□□□ -2.19
PKP4Q99569 Y_RNA.370-201ENST00000365589 108 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 Y_RNA.494-201ENST00000384432 111 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 Y_RNA.563-201ENST00000384707 108 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 Y_RNA.617-201ENST00000410920 90 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 RPS29P24-201ENST00000486345 171 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 RNU6-1053P-201ENST00000515930 101 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 RNU6-917P-201ENST00000516294 104 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 SNORA74.3-201ENST00000517108 154 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 AC133485.4-201ENST00000561835 220 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 AC138907.4-201ENST00000570107 226 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 MIR548AR-201ENST00000582191 57 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 AC106754.2-201ENST00000623006 233 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 AC091932.4-201ENST00000623386 200 ntBASIC1.37□□□□□ -2.19
PKP4Q99569 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PKP4Q99569 AL596211.1-201ENST00000569873 2277 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNU6-349P-201ENST00000362402 107 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 Y_RNA.525-201ENST00000384570 113 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 Y_RNA.629-201ENST00000411368 105 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNU6-998P-201ENST00000515894 101 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RN7SKP19-201ENST00000516016 252 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 RNU6-1061P-201ENST00000516530 99 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 AC108081.1-201ENST00000604358 221 ntBASIC1.36□□□□□ -2.19
PKP4Q99569 MIR342-201ENST00000362212 99 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 Y_RNA.273-201ENST00000364703 102 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 SNORD58C-201ENST00000365223 64 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 RNY1P6-201ENST00000384193 109 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 RNU6-1067P-201ENST00000384752 107 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 MIR653-201ENST00000385279 96 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 RNU6-735P-201ENST00000410612 107 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 AL035398.1-201ENST00000430869 322 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
PKP4Q99569 Y_RNA.676-201ENST00000516393 96 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.35□□□□□ -2.19
PKP4Q99569 AL137067.1-201ENST00000615933 120 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 MIR3914-2-201ENST00000637339 95 ntBASIC1.35□□□□□ -2.19
PKP4Q99569 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
PKP4Q99569 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 MIR302B-201ENST00000362188 73 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 MIR337-201ENST00000362281 93 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 RNU6-834P-201ENST00000362367 110 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms