Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA25.3-201ENST00000363205 127 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 Y_RNA.294-201ENST00000364916 102 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 SNORA24-201ENST00000384096 131 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 SNORA51.10-201ENST00000384418 136 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS50Q96JG6 RNU6-913P-201ENST00000390913 95 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS50Q96JG6 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 RNU2-11P-201ENST00000459191 187 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 AL596211.1-201ENST00000569873 2277 ntBASIC1.48□□□□□ -2.17
VPS50Q96JG6 Y_RNA.120-201ENST00000363304 110 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 MTND4LP9-201ENST00000427694 174 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 AL035398.1-201ENST00000430869 322 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS50Q96JG6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 Y_RNA.690-201ENST00000516603 95 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS50Q96JG6 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 MIR4251-201ENST00000635819 61 ntBASIC1.47□□□□□ -2.17
VPS50Q96JG6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS50Q96JG6 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 HMGN1P33-201ENST00000432945 451 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 RNU7-96P-201ENST00000459535 64 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 RNU5E-3P-201ENST00000515913 68 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
VPS50Q96JG6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS50Q96JG6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS50Q96JG6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS50Q96JG6 RNU6-704P-201ENST00000364162 103 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 MIR613-201ENST00000385248 95 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 AL603914.1-201ENST00000401964 204 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 BTF3P4-201ENST00000418852 495 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 RN7SKP88-201ENST00000516847 250 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 AP001328.1-201ENST00000528550 176 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 AL022345.2-201ENST00000606307 135 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 7SK.8-201ENST00000612110 250 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS50Q96JG6 7SK.11-201ENST00000615477 250 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 7SK.13-201ENST00000622040 250 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 AP001340.1-201ENST00000624405 217 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 ZNF209P-201ENST00000593450 2304 ntBASIC1.45□□□□□ -2.18
VPS50Q96JG6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNY1P10-201ENST00000363268 113 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNU1-133P-201ENST00000364867 167 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 SNORD18B-201ENST00000365659 72 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNU4-62P-201ENST00000410125 130 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS50Q96JG6 AC090844.1-201ENST00000422019 156 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNU7-80P-201ENST00000459562 61 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 RNU7-70P-201ENST00000516941 66 ntBASIC1.44□□□□□ -2.18
VPS50Q96JG6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.44□□□□□ -2.18
VPS50Q96JG6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS50Q96JG6 MIR302B-201ENST00000362188 73 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 RNU4-16P-201ENST00000364737 141 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 SNORD50.2-201ENST00000365465 70 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 SNORA70.7-201ENST00000384159 133 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 SNORA40-201ENST00000388090 126 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS50Q96JG6 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 MIR3121-201ENST00000579680 77 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 AC108081.1-201ENST00000604358 221 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 AC091895.1-201ENST00000624494 256 ntBASIC1.43□□□□□ -2.18
VPS50Q96JG6 RNU6-349P-201ENST00000362402 107 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 RNU7-73P-201ENST00000458743 63 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 RNU7-53P-201ENST00000516705 60 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 AP003716.2-201ENST00000528260 108 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 AL020996.3-201ENST00000606617 222 ntBASIC1.42□□□□□ -2.18
VPS50Q96JG6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 SNORA26.6-201ENST00000391256 115 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 MTATP6P21-201ENST00000440681 189 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 snoU13.16-201ENST00000459350 104 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS50Q96JG6 RNU6-971P-201ENST00000516920 106 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 MIR8055-201ENST00000610739 97 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 AC011603.4-201ENST00000611325 277 ntBASIC1.41□□□□□ -2.18
VPS50Q96JG6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
VPS50Q96JG6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms