Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 AC245517.4-201ENST00000448601 281 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 RNU7-34P-201ENST00000459394 64 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 RNA5SP445-201ENST00000515889 115 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 RNA5SP395-201ENST00000516567 118 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 SNORA31.17-201ENST00000516953 127 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 MIR3618-201ENST00000580330 88 ntBASIC2.33□□□□□ -2.04
DDX1Q92499 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DDX1Q92499 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
DDX1Q92499 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX1Q92499 SNORD115-19-201ENST00000363098 82 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 SNORD115-18-201ENST00000363293 82 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 SNORD115-17-201ENST00000364612 82 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 Y_RNA.290-201ENST00000364879 114 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 Y_RNA.494-201ENST00000384432 111 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 Y_RNA.593-201ENST00000410292 98 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RNA5SP144-201ENST00000410846 116 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 AC096949.1-201ENST00000412047 152 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 PGBD4P5-201ENST00000445958 426 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RPL39P25-201ENST00000449384 154 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RNU7-6P-201ENST00000516845 62 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 RNU7-70P-201ENST00000516941 66 ntBASIC2.32□□□□□ -2.04
DDX1Q92499 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX1Q92499 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX1Q92499 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX1Q92499 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 RNY3P2-201ENST00000362918 102 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 Y_RNA.355-201ENST00000365462 98 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 SNORD78.1-201ENST00000390866 65 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 Y_RNA.601-201ENST00000410500 113 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX1Q92499 AC244636.1-201ENST00000421152 228 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 AL512326.2-201ENST00000426359 151 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 AL353813.1-201ENST00000440700 253 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 RPS23P4-201ENST00000487908 423 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 AC113410.1-201ENST00000505029 247 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 SNORA18.7-201ENST00000516910 131 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 AC095038.3-201ENST00000634439 195 ntBASIC2.31□□□□□ -2.04
DDX1Q92499 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.31□□□□□ -2.04
DDX1Q92499 RNU6-363P-201ENST00000362895 105 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 Y_RNA.219-201ENST00000364232 113 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 RNU4-36P-201ENST00000364294 144 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
DDX1Q92499 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX1Q92499 AC114811.1-201ENST00000507207 168 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 MIR4778-201ENST00000577635 80 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 Y_RNA.773-201ENST00000607168 90 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.3□□□□□ -2.04
DDX1Q92499 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX1Q92499 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 Y_RNA.17-201ENST00000362433 111 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 Y_RNA.531-201ENST00000384589 121 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR499A-201ENST00000384903 122 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR577-201ENST00000385196 96 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR518E-201ENST00000385252 88 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 POLR2J4-204ENST00000418424 324 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 RNU6-998P-201ENST00000515894 101 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 RNU6-1116P-201ENST00000517269 99 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 AC004812.1-201ENST00000540773 146 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 snoU13.31-201ENST00000607291 104 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 AC015726.2-201ENST00000620112 122 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR1255B1-201ENST00000636325 63 ntBASIC2.29□□□□□ -2.04
DDX1Q92499 MIR494-201ENST00000349529 81 ntBASIC2.28□□□□□ -2.04
DDX1Q92499 SNORA27-201ENST00000384323 126 ntBASIC2.28□□□□□ -2.04
DDX1Q92499 MIR4694-201ENST00000578534 80 ntBASIC2.28□□□□□ -2.04
DDX1Q92499 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.28□□□□□ -2.04
DDX1Q92499 AC027279.3-201ENST00000625055 122 ntBASIC2.28□□□□□ -2.04
DDX1Q92499 RNU6-832P-201ENST00000363319 107 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 RNU4-16P-201ENST00000364737 141 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 Y_RNA.360-201ENST00000365512 102 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 RNU6-163P-201ENST00000384396 106 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 U8.13-201ENST00000390842 128 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 RNU6-1258P-201ENST00000516911 111 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.27□□□□□ -2.05
DDX1Q92499 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 AC012531.4-201ENST00000616509 177 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 AC025521.1-201ENST00000621624 286 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 AC021613.1-201ENST00000623880 111 ntBASIC2.27□□□□□ -2.05
DDX1Q92499 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
DDX1Q92499 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
DDX1Q92499 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-34-201ENST00000362441 82 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-12-201ENST00000362583 82 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-29-201ENST00000362834 82 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-2-201ENST00000362842 82 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-9-201ENST00000362912 82 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-21-201ENST00000362963 81 ntBASIC2.26□□□□□ -2.05
DDX1Q92499 SNORD115-14-201ENST00000363090 81 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms