Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 AL121914.1-201ENST00000450188 156 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 U7.7-201ENST00000459276 60 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 MIR4698-201ENST00000577795 80 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 MIR3129-201ENST00000581095 76 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 MIR151B-201ENST00000584249 96 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 AC099654.10-201ENST00000640395 161 ntBASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 SNORD114-27-201ENST00000363766 70 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.350-201ENST00000365409 98 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AC244023.1-201ENST00000426884 112 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU7-73P-201ENST00000458743 63 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU2-11P-201ENST00000459191 187 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 snoU13.21-201ENST00000459368 105 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 Y_RNA.668-201ENST00000516233 93 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU7-53P-201ENST00000516705 60 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AC242498.1-201ENST00000604134 111 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 RNU2-4P-201ENST00000606190 192 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AC062037.2-201ENST00000610137 73 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 AC104465.1-201ENST00000611365 139 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 MIR6788-201ENST00000618842 66 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 MIR6734-201ENST00000621166 68 ntBASIC0.59□□□□□ -2.31
CCDC71LQ8N9Z2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-103P-201ENST00000363686 107 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-923P-201ENST00000364753 107 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 RNY4P28-201ENST00000365281 93 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.440-201ENST00000384120 114 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.539-201ENST00000384635 107 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 SNORD38B-201ENST00000384690 67 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 SNORD77.3-201ENST00000391113 65 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 SNORD83.1-201ENST00000411362 77 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MTND3P2-201ENST00000438452 342 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MTND1P19-201ENST00000511780 315 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MIR4744-201ENST00000581563 82 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MIR3128-201ENST00000581957 66 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MIR4264-201ENST00000583520 66 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 AC097639.2-201ENST00000603159 172 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 AL353621.2-201ENST00000605340 133 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 MIR8055-201ENST00000610739 97 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 AL136317.1-201ENST00000612653 226 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 U4.1-201ENST00000620349 87 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 SNORD38B-202ENST00000625943 69 ntBASIC0.58□□□□□ -2.32
CCDC71LQ8N9Z2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 MIR96-201ENST00000362288 78 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-934P-201ENST00000365154 107 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-574P-201ENST00000384265 107 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-196P-201ENST00000384315 107 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 AC015818.7-201ENST00000428754 109 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 AC087499.7-201ENST00000441958 109 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 RNU7-96P-201ENST00000459535 64 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-998P-201ENST00000515894 101 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.680-201ENST00000516441 93 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 MIR4503-201ENST00000582187 83 ntBASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCDC71LQ8N9Z2 MIR377-201ENST00000362145 69 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.20-201ENST00000362479 113 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-580P-201ENST00000365159 107 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 MIR520E-201ENST00000384867 87 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-578P-201ENST00000390980 103 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 MIR548I3-201ENST00000408378 149 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-1190P-201ENST00000410811 104 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 RNU7-62P-201ENST00000458856 62 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 AC113410.1-201ENST00000505029 247 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 RMST_2.1-201ENST00000617263 136 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 MIR376A2-201ENST00000636782 80 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 Z97988.1-201ENST00000637697 135 ntBASIC0.56□□□□□ -2.32
CCDC71LQ8N9Z2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 SNORA20.1-201ENST00000364790 130 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 RNU6-702P-201ENST00000364982 107 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 AL078595.1-201ENST00000404458 226 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 SEPT7P4-201ENST00000437076 306 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 RNU7-45P-201ENST00000459460 63 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
CCDC71LQ8N9Z2 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms