Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 MIR5187-201ENST00000583479 76 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 DLEU2_3.1-201ENST00000620005 73 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 RNU6-53P-201ENST00000365367 106 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 MIR183-201ENST00000384958 110 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 RNU6-1165P-201ENST00000410119 107 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 AL691482.2-201ENST00000457453 84 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 U6.105-201ENST00000637379 88 ntBASIC4.34□□□□□ -1.71
SAMD1Q6SPF0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SAMD1Q6SPF0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 RNU6-1187P-201ENST00000364771 110 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 MIR199A2-201ENST00000385289 110 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 HMGN2P3-201ENST00000433603 273 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 HMGN2P5-201ENST00000436882 273 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 RN7SL293P-201ENST00000481765 281 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 RNA5SP164-201ENST00000516533 110 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 NDUFB9P3-201ENST00000521269 501 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 MIR3126-201ENST00000577443 74 ntBASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SAMD1Q6SPF0 RNU6-664P-201ENST00000362381 107 ntBASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 RNU6-112P-201ENST00000363599 104 ntBASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 SNORD101-201ENST00000384027 73 ntBASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 RNA5SP137-201ENST00000516833 135 ntBASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SAMD1Q6SPF0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 RNU1-18P-201ENST00000363062 164 ntBASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 RNVU1-14-201ENST00000384770 164 ntBASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 EIF4BP1-201ENST00000554881 351 ntBASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 MIR4696-201ENST00000581431 70 ntBASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.31□□□□□ -1.72
SAMD1Q6SPF0 RNU6-1079P-201ENST00000362861 110 ntBASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 RNU6-1052P-201ENST00000411398 104 ntBASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 TRAJ51-201ENST00000504127 63 ntBASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 RNU6-719P-201ENST00000516671 104 ntBASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 SNORA70.18-201ENST00000516696 98 ntBASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SAMD1Q6SPF0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 SNORA24B-201ENST00000384176 131 ntBASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 RPS27P29-201ENST00000463110 252 ntBASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 Y_RNA.722-201ENST00000517279 114 ntBASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 MIR4513-201ENST00000581077 86 ntBASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SAMD1Q6SPF0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 SNORD9-201ENST00000362566 104 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 RNA5SP48-201ENST00000363969 126 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 MIR1283-2-201ENST00000408621 87 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 RPL23AP94-201ENST00000512518 302 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 MIR4491-201ENST00000581087 68 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 AL137849.1-201ENST00000604767 169 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 U6.100-201ENST00000636230 99 ntBASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.28□□□□□ -1.72
SAMD1Q6SPF0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 RNA5SP50-201ENST00000363731 107 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 Y_RNA.536-201ENST00000384621 113 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 SNORA48.1-201ENST00000390879 135 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 TRBV12-2-201ENST00000489763 344 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 RNU6-322P-201ENST00000516010 103 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 MIR7975-201ENST00000619350 68 ntBASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SAMD1Q6SPF0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 AP006437.1-201ENST00000641440 3685 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 SNORD56.5-201ENST00000364281 72 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 RNU1-138P-201ENST00000384093 164 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 U8.13-201ENST00000390842 128 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 RNA5SP424-201ENST00000390988 115 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 SNORD100-201ENST00000408573 76 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 RNA5SP492-201ENST00000411330 114 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 AC025518.1-201ENST00000479856 347 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 Y_RNA.809-201ENST00000516058 95 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 AL449363.1-201ENST00000617815 186 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 MIR7978-201ENST00000636158 59 ntBASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC4.26□□□□□ -1.73
SAMD1Q6SPF0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms