Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-1062P-201ENST00000383908 107 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU6-449P-201ENST00000383914 107 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU6-187P-201ENST00000384139 106 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU6-125P-201ENST00000384505 107 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 SNORA20-201ENST00000384662 132 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
HOXA13P31271 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU6-460P-201ENST00000391158 108 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 RNU7-197P-201ENST00000458836 62 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 AP003484.1-201ENST00000530974 250 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 DNAJC19P2-201ENST00000593340 302 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 Y_RNA.778-201ENST00000620203 90 ntBASIC1.21□□□□□ -2.22
HOXA13P31271 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HOXA13P31271 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HOXA13P31271 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HOXA13P31271 Y_RNA.52-201ENST00000362760 96 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 RNU1-93P-201ENST00000364704 169 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 SNORA26-201ENST00000391286 122 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 SNORA25.12-201ENST00000516202 82 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 SCARNA15-202ENST00000516881 127 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 MIR4764-201ENST00000580680 88 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 MIR3133-201ENST00000583157 78 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 MIR5197-201ENST00000583721 112 ntBASIC1.2□□□□□ -2.22
HOXA13P31271 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.224-201ENST00000364308 111 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.251-201ENST00000364551 99 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.440-201ENST00000384120 114 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.497-201ENST00000384447 98 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 MIR569-201ENST00000385228 96 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 SNORD37.2-201ENST00000391075 66 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 RNU6-1054P-201ENST00000411293 104 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 RPS26P48-201ENST00000491713 339 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 RNU6-426P-201ENST00000516464 97 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 Y_RNA.686-201ENST00000516548 134 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 RNU7-43P-201ENST00000516554 64 ntBASIC1.19□□□□□ -2.22
HOXA13P31271 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 MIR624-201ENST00000385217 97 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HOXA13P31271 SNORA75.5-201ENST00000391291 81 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 RNU6-1190P-201ENST00000410811 104 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 RNA5SP127-201ENST00000411051 133 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 RNU2-13P-201ENST00000515909 113 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 RNU6-126P-201ENST00000516685 103 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 RNU6-1149P-201ENST00000516810 97 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXA13P31271 AC112693.2-201ENST00000556538 232 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 AC134878.1-201ENST00000619901 243 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 MIR6844-201ENST00000637122 62 ntBASIC1.18□□□□□ -2.22
HOXA13P31271 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HOXA13P31271 MIR342-201ENST00000362212 99 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 Y_RNA.215-201ENST00000364204 112 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 SNORA25.7-201ENST00000364375 127 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 RNU6-1189P-201ENST00000383958 107 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 Y_RNA.542-201ENST00000384641 111 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 RNU6-1067P-201ENST00000384752 107 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 RNU7-45P-201ENST00000459460 63 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 RPS23P4-201ENST00000487908 423 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 AC008133.2-201ENST00000624540 351 ntBASIC1.17□□□□□ -2.22
HOXA13P31271 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXA13P31271 Y_RNA.330-201ENST00000365230 109 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 Y_RNA.400-201ENST00000383963 111 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 SNORA27-201ENST00000384323 126 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 RNU6-913P-201ENST00000390913 95 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 RNA5SP236-201ENST00000516169 116 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXA13P31271 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
HOXA13P31271 MIR4791-201ENST00000607666 84 ntBASIC1.16□□□□□ -2.22
HOXA13P31271 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXA13P31271 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HOXA13P31271 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.15□□□□□ -2.23
HOXA13P31271 MIR103A2-201ENST00000362154 78 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 RNU6-1292P-201ENST00000383856 107 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 AC090844.1-201ENST00000422019 156 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 MIR548AO-201ENST00000579992 96 ntBASIC1.15□□□□□ -2.23
HOXA13P31271 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-34-201ENST00000362441 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-12-201ENST00000362583 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-29-201ENST00000362834 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-9-201ENST00000362912 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-21-201ENST00000362963 81 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-14-201ENST00000363090 81 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-13-201ENST00000363358 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-41-201ENST00000363608 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-11-201ENST00000363616 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-5-201ENST00000363633 82 ntBASIC1.14□□□□□ -2.23
HOXA13P31271 SNORD115-39-201ENST00000363694 82 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms