Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR5009-201ENST00000578736 100 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR4305-201ENST00000583252 102 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 AC087741.2-201ENST00000619415 172 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR342-201ENST00000362212 99 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNA5SP482-201ENST00000391269 118 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 AL353813.1-201ENST00000440700 253 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU7-94P-201ENST00000459576 63 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU2-19P-201ENST00000517288 84 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 MIR5094-201ENST00000578766 85 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU1-133P-201ENST00000364867 167 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU6-294P-201ENST00000364999 102 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 MIR548D2-201ENST00000384955 97 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 SNX2P2-201ENST00000424553 323 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU6-904P-201ENST00000516206 101 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AL513534.2-201ENST00000603836 250 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 U4atac.1-201ENST00000618345 95 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 MIR1255B1-201ENST00000636325 63 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNY4P6-201ENST00000363667 96 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNY4P29-201ENST00000410801 97 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 POLR2J4-204ENST00000418424 324 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC015922.2-201ENST00000435593 184 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC093850.1-201ENST00000454121 251 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNA5SP168-201ENST00000516642 112 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC062037.1-201ENST00000605302 128 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNU6-424P-201ENST00000384367 105 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR802-201ENST00000390235 94 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR1302-5-201ENST00000408164 150 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNA5SP144-201ENST00000410846 116 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR4529-201ENST00000578110 78 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR548Z-201ENST00000584743 97 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.67□□□□□ -2.14
SNHG28P0DPA3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNHG28P0DPA3 SNORA63D-201ENST00000364359 132 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORA27-201ENST00000384323 126 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-163P-201ENST00000384396 106 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MIR516B2-201ENST00000385190 85 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORD28B-201ENST00000390993 75 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RPS3AP1-201ENST00000413190 320 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MTATP8P2-201ENST00000435212 202 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC113410.1-201ENST00000505029 247 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-998P-201ENST00000515894 101 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU7-6P-201ENST00000516845 62 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORA31.25-201ENST00000517242 134 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC004812.1-201ENST00000540773 146 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC005786.1-201ENST00000588553 154 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNHG28P0DPA3 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 MIR526A1-201ENST00000384897 85 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU11-5P-201ENST00000391216 129 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 SNORA40.13-201ENST00000516379 120 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AC141557.1-201ENST00000540982 400 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AL162726.3-218ENST00000636401 95 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 MIR605-201ENST00000385078 83 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 SNORA26.6-201ENST00000391256 115 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 RNU6-592P-201ENST00000411333 103 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 AC090821.2-201ENST00000523552 176 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.64□□□□□ -2.15
SNHG28P0DPA3 AC021613.1-201ENST00000623880 111 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 270.3 ms