Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR5009-201ENST00000578736 100 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR4305-201ENST00000583252 102 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 AC087741.2-201ENST00000619415 172 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR342-201ENST00000362212 99 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNA5SP482-201ENST00000391269 118 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 MIR1304-201ENST00000408243 91 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 AL353813.1-201ENST00000440700 253 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU7-94P-201ENST00000459576 63 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 RNU2-19P-201ENST00000517288 84 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 MIR5094-201ENST00000578766 85 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
SNHG28P0DPA3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU1-133P-201ENST00000364867 167 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU6-294P-201ENST00000364999 102 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 MIR548D2-201ENST00000384955 97 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 SNX2P2-201ENST00000424553 323 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNU6-904P-201ENST00000516206 101 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
SNHG28P0DPA3 AL513534.2-201ENST00000603836 250 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 U4atac.1-201ENST00000618345 95 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 MIR1255B1-201ENST00000636325 63 ntBASIC1.69□□□□□ -2.14
SNHG28P0DPA3 RNY4P6-201ENST00000363667 96 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNY4P29-201ENST00000410801 97 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 POLR2J4-204ENST00000418424 324 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC015922.2-201ENST00000435593 184 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC093850.1-201ENST00000454121 251 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNA5SP168-201ENST00000516642 112 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AC062037.1-201ENST00000605302 128 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
SNHG28P0DPA3 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNU6-424P-201ENST00000384367 105 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR802-201ENST00000390235 94 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR1302-5-201ENST00000408164 150 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNA5SP144-201ENST00000410846 116 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR4529-201ENST00000578110 78 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 MIR548Z-201ENST00000584743 97 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
SNHG28P0DPA3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.67□□□□□ -2.14
SNHG28P0DPA3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNHG28P0DPA3 SNORA63D-201ENST00000364359 132 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORA27-201ENST00000384323 126 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-163P-201ENST00000384396 106 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MIR516B2-201ENST00000385190 85 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORD28B-201ENST00000390993 75 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RPS3AP1-201ENST00000413190 320 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MTATP8P2-201ENST00000435212 202 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC113410.1-201ENST00000505029 247 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU6-998P-201ENST00000515894 101 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 RNU7-6P-201ENST00000516845 62 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SNORA31.25-201ENST00000517242 134 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC004812.1-201ENST00000540773 146 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 AC005786.1-201ENST00000588553 154 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNHG28P0DPA3 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 MIR526A1-201ENST00000384897 85 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU11-5P-201ENST00000391216 129 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 SNORA40.13-201ENST00000516379 120 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AC141557.1-201ENST00000540982 400 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 AL162726.3-218ENST00000636401 95 ntBASIC1.65□□□□□ -2.15
SNHG28P0DPA3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 MIR605-201ENST00000385078 83 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 SNORA26.6-201ENST00000391256 115 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 RNU6-592P-201ENST00000411333 103 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 AC090821.2-201ENST00000523552 176 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
SNHG28P0DPA3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.64□□□□□ -2.15
SNHG28P0DPA3 AC021613.1-201ENST00000623880 111 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms