Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 RNU2-11P-201ENST00000459191 187 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 RNU7-95P-201ENST00000459222 64 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.82□□□□□ -2.28
SMIM18P0DKX4 RNU6-237P-201ENST00000515985 71 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.82□□□□□ -2.28
SMIM18P0DKX4 MIR4769-201ENST00000584126 77 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 MIR376A2-201ENST00000636782 80 ntBASIC0.82□□□□□ -2.28
SMIM18P0DKX4 MIR411-201ENST00000362239 96 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 Y_RNA.401-201ENST00000383965 117 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 RNU6-643P-201ENST00000384018 107 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 RNU4-62P-201ENST00000410125 130 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 RNA5SP95-201ENST00000410319 137 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 AC108729.3-201ENST00000513484 108 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
SMIM18P0DKX4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
SMIM18P0DKX4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
SMIM18P0DKX4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SMIM18P0DKX4 Y_RNA.454-201ENST00000384224 113 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 MIR624-201ENST00000385217 97 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 MIR548I3-201ENST00000408378 149 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 MIR1827-201ENST00000408549 66 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 AC141273.2-201ENST00000618989 130 ntBASIC0.8□□□□□ -2.28
SMIM18P0DKX4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SMIM18P0DKX4 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 SNORA1.1-201ENST00000364671 133 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 RNU6-994P-201ENST00000410507 111 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 RNA5SP261-201ENST00000410536 106 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 AP1B1P2-201ENST00000416196 106 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 MIR4431-201ENST00000579990 94 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 snoU13.31-201ENST00000607291 104 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 U6.106-201ENST00000636360 105 ntBASIC0.79□□□□□ -2.28
SMIM18P0DKX4 MIR1-1-201ENST00000362147 71 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 MIR302B-201ENST00000362188 73 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 Y_RNA.188-201ENST00000363952 111 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 SNORA26.6-201ENST00000391256 115 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 RNA5SP127-201ENST00000411051 133 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 AL138752.1-201ENST00000452964 351 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 AC087343.1-201ENST00000477341 475 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
SMIM18P0DKX4 MIR337-201ENST00000362281 93 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-1020P-201ENST00000363684 107 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-934P-201ENST00000365154 107 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-597P-201ENST00000365620 102 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-747P-201ENST00000390928 104 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 snosnR66.1-201ENST00000391095 99 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-241P-201ENST00000391148 104 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-177P-201ENST00000411257 104 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 MIR18B-201ENST00000454574 71 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.77□□□□□ -2.29
SMIM18P0DKX4 AC130289.1-201ENST00000577321 73 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 MIR6717-201ENST00000622747 73 ntBASIC0.77□□□□□ -2.29
SMIM18P0DKX4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SMIM18P0DKX4 RNU6-369P-201ENST00000362515 102 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RNU6-379P-201ENST00000363813 104 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 SNORA25.7-201ENST00000364375 127 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 SNORA17.3-201ENST00000391159 129 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RNU2-64P-201ENST00000411315 191 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 HMGN1P33-201ENST00000432945 451 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RNU7-62P-201ENST00000458856 62 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 snoU13.2-201ENST00000459201 104 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 SCARNA15-202ENST00000516881 127 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 RNU6-1271P-201ENST00000517049 105 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 MIR3152-201ENST00000579801 74 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 AC091932.4-201ENST00000623386 200 ntBASIC0.76□□□□□ -2.29
SMIM18P0DKX4 MIR342-201ENST00000362212 99 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 RNY1P10-201ENST00000363268 113 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 Y_RNA.327-201ENST00000365201 102 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 RNU6-47P-201ENST00000383866 107 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 MIR563-201ENST00000385080 79 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.75□□□□□ -2.29
SMIM18P0DKX4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.75□□□□□ -2.29
SMIM18P0DKX4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SMIM18P0DKX4 Y_RNA.233-201ENST00000364407 101 ntBASIC0.74□□□□□ -2.29
SMIM18P0DKX4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
SMIM18P0DKX4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms