Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 MIR4744-201ENST00000581563 82 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 AC097639.2-201ENST00000603159 172 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 AC022709.1-201ENST00000615967 87 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 MIR376A2-201ENST00000636782 80 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 MIR342-201ENST00000362212 99 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 RNU6-702P-201ENST00000364982 107 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 SNORA26-201ENST00000391286 122 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 SNORD58.1-201ENST00000391313 66 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 RNU6-613P-201ENST00000410412 108 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.89□□□□□ -2.27
TSPAN1O60635 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.89□□□□□ -2.27
TSPAN1O60635 AL121914.1-201ENST00000450188 156 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 snoU13.16-201ENST00000459350 104 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 snoU13.21-201ENST00000459368 105 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 RPS29P24-201ENST00000486345 171 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 RNU6-197P-201ENST00000516680 100 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 MIR3149-201ENST00000584629 83 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 MIR7111-201ENST00000619751 72 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 MIR6734-201ENST00000621166 68 ntBASIC0.89□□□□□ -2.27
TSPAN1O60635 Y_RNA.7-201ENST00000362352 102 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNU6-728P-201ENST00000365375 104 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNU6-1189P-201ENST00000383958 107 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 MIR489-201ENST00000384923 84 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 MIR605-201ENST00000385078 83 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 SNORD111-201ENST00000408139 94 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNU6-1190P-201ENST00000410811 104 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 AC244023.1-201ENST00000426884 112 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 AC242498.1-201ENST00000604134 111 ntBASIC0.88□□□□□ -2.27
TSPAN1O60635 RNU6-103P-201ENST00000363686 107 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 Y_RNA.354-201ENST00000365448 111 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 Y_RNA.440-201ENST00000384120 114 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 Y_RNA.452-201ENST00000384202 108 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TSPAN1O60635 RNU6-578P-201ENST00000390980 103 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 AL035398.1-201ENST00000430869 322 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 7SK.10-201ENST00000621414 298 ntBASIC0.87□□□□□ -2.27
TSPAN1O60635 AC023934.1-201ENST00000574529 2389 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 SNORA20.1-201ENST00000364790 130 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 Y_RNA.478-201ENST00000384358 107 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 AC015818.7-201ENST00000428754 109 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 FABP5P4-201ENST00000437203 171 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 AC087499.7-201ENST00000441958 109 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 RNU2-11P-201ENST00000459191 187 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 Y_RNA.797-201ENST00000515977 94 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.86□□□□□ -2.27
TSPAN1O60635 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 AL162730.1-201ENST00000605734 292 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 MIR8055-201ENST00000610739 97 ntBASIC0.86□□□□□ -2.27
TSPAN1O60635 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.85□□□□□ -2.27
TSPAN1O60635 Y_RNA.144-201ENST00000363521 113 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 Y_RNA.168-201ENST00000363740 102 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 Y_RNA.410-201ENST00000383992 113 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 RNU6-463P-201ENST00000384340 107 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 SNORA79-201ENST00000408376 140 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 RNU7-73P-201ENST00000458743 63 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 RNU7-45P-201ENST00000459460 63 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 RNU6-1023P-201ENST00000516137 106 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 MIR5000-201ENST00000577717 103 ntBASIC0.85□□□□□ -2.27
TSPAN1O60635 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
TSPAN1O60635 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TSPAN1O60635 Y_RNA.182-201ENST00000363880 111 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 Y_RNA.571-201ENST00000384753 98 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 RNU4-43P-201ENST00000410628 137 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 SNORD83.1-201ENST00000411362 77 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.84□□□□□ -2.27
TSPAN1O60635 RNU6-998P-201ENST00000515894 101 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 RNU7-53P-201ENST00000516705 60 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 AP000753.3-201ENST00000604083 169 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 uc_338.6-201ENST00000613544 171 ntBASIC0.84□□□□□ -2.27
TSPAN1O60635 Y_RNA.351-201ENST00000365436 96 ntBASIC0.83□□□□□ -2.28
TSPAN1O60635 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
TSPAN1O60635 SEPT7P4-201ENST00000437076 306 ntBASIC0.83□□□□□ -2.28
TSPAN1O60635 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
TSPAN1O60635 RNU4-71P-201ENST00000516258 113 ntBASIC0.83□□□□□ -2.28
TSPAN1O60635 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TSPAN1O60635 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
TSPAN1O60635 RNU6-580P-201ENST00000365159 107 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 MT-TN-201ENST00000387400 73 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 MIR548I3-201ENST00000408378 149 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 RNU7-96P-201ENST00000459535 64 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 MIR4264-201ENST00000583520 66 ntBASIC0.82□□□□□ -2.28
TSPAN1O60635 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
TSPAN1O60635 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
TSPAN1O60635 RNU6-978P-201ENST00000364371 103 ntBASIC0.81□□□□□ -2.28
TSPAN1O60635 RNU6-47P-201ENST00000383866 107 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms