Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 HSPE1P25-201ENST00000455484 251 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 RNU6-504P-201ENST00000516568 104 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 RNU6-365P-201ENST00000517113 106 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.32□□□□□ -2.46
LSM1O15116 MIR4724-201ENST00000579485 89 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 AC084781.2-201ENST00000615568 161 ntBASIC-0.32□□□□□ -2.46
LSM1O15116 RNA5SP457-201ENST00000363657 124 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 RNU6V-201ENST00000384105 107 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 RPL39P34-201ENST00000477141 156 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 MRPS35P2-201ENST00000508242 191 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 SNORA20.3-201ENST00000516880 132 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 MIR3152-201ENST00000579801 74 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 MIR4305-201ENST00000583252 102 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 AC093783.1-201ENST00000612976 329 ntBASIC-0.33□□□□□ -2.46
LSM1O15116 MIR367-201ENST00000362299 68 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 RNU6-102P-201ENST00000384485 104 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 MIR526A2-201ENST00000390198 65 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 MIR892B-201ENST00000401279 77 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 RNU7-129P-201ENST00000516128 62 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 MIR2909-201ENST00000617113 69 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 AL109933.3-201ENST00000619095 188 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 AC244669.1-204ENST00000621564 178 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 MIR1295B-201ENST00000636144 60 ntBASIC-0.34□□□□□ -2.46
LSM1O15116 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 RNU6-514P-201ENST00000384208 107 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 RNU6-876P-201ENST00000391295 104 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 RNU7-45P-201ENST00000459460 63 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.35□□□□□ -2.47
LSM1O15116 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
LSM1O15116 AC141846.1-201ENST00000568348 142 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 MIR5688-201ENST00000580619 83 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 MIR7111-201ENST00000619751 72 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 MIR499B-201ENST00000636498 73 ntBASIC-0.35□□□□□ -2.47
LSM1O15116 RNU6-403P-201ENST00000363163 104 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 SNORD113-8-201ENST00000363497 74 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 RNU6-929P-201ENST00000384429 107 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 RNU6-269P-201ENST00000391077 97 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 RNA5SP261-201ENST00000410536 106 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 MIR4752-201ENST00000579672 72 ntBASIC-0.36□□□□□ -2.47
LSM1O15116 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 RNA5SP237-201ENST00000410414 113 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 MTND5P34-201ENST00000568888 325 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 AC067863.3-201ENST00000624172 122 ntBASIC-0.37□□□□□ -2.47
LSM1O15116 RNU6-484P-201ENST00000384016 107 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 RNU6-949P-201ENST00000384040 107 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 PMCHL1-202ENST00000423102 261 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 AC040926.1-201ENST00000530195 238 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 AC097639.2-201ENST00000603159 172 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 MIR376A2-201ENST00000636782 80 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 MIR6841-201ENST00000637129 72 ntBASIC-0.38□□□□□ -2.47
LSM1O15116 AL596211.1-201ENST00000569873 2277 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 RNU6-535P-201ENST00000384722 107 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 MIR215-201ENST00000384858 110 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 SNORD115-46-201ENST00000390982 71 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 RPL39P25-201ENST00000449384 154 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.39□□□□□ -2.47
LSM1O15116 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 AC104692.1-201ENST00000472406 90 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 RNU6-475P-201ENST00000516073 104 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 AC007485.1-201ENST00000616755 206 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.39□□□□□ -2.47
LSM1O15116 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.39□□□□□ -2.47
LSM1O15116 RNU4-40P-201ENST00000364351 143 ntBASIC-0.4□□□□□ -2.47
LSM1O15116 RNU2-55P-201ENST00000411146 174 ntBASIC-0.4□□□□□ -2.47
LSM1O15116 AC138869.1-201ENST00000568623 124 ntBASIC-0.4□□□□□ -2.47
LSM1O15116 RNU4-90P-201ENST00000362773 141 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 MIR501-201ENST00000390204 84 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
LSM1O15116 RNU7-159P-201ENST00000459284 62 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 AP003072.1-201ENST00000531740 145 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 AL132765.2-201ENST00000610812 351 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms