Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SCARNA24.2-201ENST00000516968 130 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 AC131281.1-201ENST00000522984 164 ntBASIC0.09□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.214-201ENST00000364201 112 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.338-201ENST00000365320 114 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-211P-201ENST00000384047 107 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-1228P-201ENST00000391014 107 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 MIR151B-201ENST00000584249 96 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 SNORA4-201ENST00000584302 138 ntBASIC0.08□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP432-201ENST00000362480 116 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 SNORD42.2-201ENST00000365570 69 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 SNORA26.6-201ENST00000391256 115 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP268-201ENST00000516828 124 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 MIR6504-201ENST00000613520 61 ntBASIC0.07□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.210-201ENST00000364161 110 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 SNORA1-201ENST00000384107 130 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 RNY3P14-201ENST00000384309 102 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MT-TD-201ENST00000387419 68 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 SNORA26-201ENST00000391286 122 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
HMGB1P1B2RPK0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.64-201ENST00000362845 102 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 MTND5P22-201ENST00000458380 195 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AL662814.1-201ENST00000617364 121 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 MIR376A2-201ENST00000636782 80 ntBASIC0.05□□□□□ -2.4
HMGB1P1B2RPK0 AL589743.1-201ENST00000551932 2712 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.117-201ENST00000363294 101 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU1-133P-201ENST00000364867 167 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-484P-201ENST00000384016 107 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-1289P-201ENST00000384431 106 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SNORA72.6-201ENST00000384520 129 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 MIR626-201ENST00000385032 94 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNA5SP193-201ENST00000410353 107 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SEPT7P4-201ENST00000437076 306 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 RNU6-863P-201ENST00000515989 104 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 AL596211.1-201ENST00000569873 2277 ntBASIC0.04□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.152-201ENST00000363578 100 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 SNRPGP8-201ENST00000454064 226 ntBASIC0.03□□□□□ -2.4
HMGB1P1B2RPK0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-474P-201ENST00000384243 107 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.527-201ENST00000384573 102 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 U8.15-201ENST00000390947 134 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-988P-201ENST00000519081 107 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR5688-201ENST00000580619 83 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR3129-201ENST00000581095 76 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR4801-201ENST00000582704 82 ntBASIC0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-653P-201ENST00000363074 106 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.431-201ENST00000384086 102 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP261-201ENST00000410536 106 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-237P-201ENST00000515985 71 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 SNORA31.14-201ENST00000516728 116 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 MIR4452-201ENST00000583004 71 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 MIR6082-201ENST00000613604 109 ntBASIC0.01□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.23-201ENST00000362496 106 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-453P-201ENST00000516819 85 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 MIR7107-201ENST00000611489 80 ntBASIC0□□□□□ -2.41
HMGB1P1B2RPK0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0□□□□□ -2.41
HMGB1P1B2RPK0 AL606845.1-201ENST00000404881 255 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNU2-55P-201ENST00000411146 174 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 SERF1AP1-201ENST00000514575 187 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 AP003327.1-201ENST00000529684 127 ntBASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
HMGB1P1B2RPK0 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP247-201ENST00000411181 105 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 RNA5SP153-201ENST00000516498 76 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC141846.1-201ENST00000568348 142 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 AC091932.4-201ENST00000623386 200 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 MIR924-201ENST00000638017 53 ntBASIC-0.02□□□□□ -2.41
HMGB1P1B2RPK0 UBE2WP1-201ENST00000362030 340 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.03□□□□□ -2.41
HMGB1P1B2RPK0 MIR4491-201ENST00000581087 68 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 291.5 ms