Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR376A2-201ENST00000636782 80 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-34-201ENST00000362441 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-12-201ENST00000362583 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-29-201ENST00000362834 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-9-201ENST00000362912 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-21-201ENST00000362963 81 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RNU6-888P-201ENST00000363010 101 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RNU6-653P-201ENST00000363074 106 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-14-201ENST00000363090 81 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-13-201ENST00000363358 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-41-201ENST00000363608 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-11-201ENST00000363616 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-5-201ENST00000363633 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-39-201ENST00000363694 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-4-201ENST00000363810 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-16-201ENST00000363887 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-6-201ENST00000363942 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-42-201ENST00000364273 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-15-201ENST00000364809 81 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-1-201ENST00000364961 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-26-201ENST00000365067 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-10-201ENST00000365073 81 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-43-201ENST00000365503 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-36-201ENST00000365629 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORA27-201ENST00000384323 126 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RPS26P5-201ENST00000418544 335 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD127-201ENST00000458892 86 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RNU6-504P-201ENST00000516568 104 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 MIR4282-201ENST00000583613 67 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 AP000942.4-201ENST00000604811 241 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 AC011921.3-201ENST00000605540 361 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD115-40-201ENST00000606510 82 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
NKX2-6A6NCS4 SNORD27-201ENST00000363981 72 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 SNORD24-201ENST00000383884 75 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 SNORA24-201ENST00000384096 131 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 MIR616-201ENST00000385293 97 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 SNORA40.5-201ENST00000391061 128 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 RNU6-381P-201ENST00000391259 108 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 AC087499.4-201ENST00000448505 178 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 snoU13.16-201ENST00000459350 104 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 RNU7-45P-201ENST00000459460 63 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 MIR5688-201ENST00000580619 83 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 AL353765.1-201ENST00000605514 183 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 U6.104-201ENST00000637979 90 ntBASIC0.55□□□□□ -2.32
NKX2-6A6NCS4 RNU6-369P-201ENST00000362515 102 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.149-201ENST00000363558 117 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.292-201ENST00000364904 97 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 RNU6-493P-201ENST00000391321 108 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 AC067940.1-201ENST00000458411 300 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 RNU2-11P-201ENST00000459191 187 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 U7.7-201ENST00000459276 60 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 MIR3129-201ENST00000581095 76 ntBASIC0.54□□□□□ -2.32
NKX2-6A6NCS4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 MIR1-1-201ENST00000362147 71 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.133-201ENST00000363428 110 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 RNU6-923P-201ENST00000364753 107 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 RNU6-934P-201ENST00000365154 107 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.352-201ENST00000365439 102 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 SNORD77.3-201ENST00000391113 65 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 RPS29P24-201ENST00000486345 171 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 MTND1P19-201ENST00000511780 315 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 AC011195.1-201ENST00000578177 177 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 AP000753.3-201ENST00000604083 169 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 MIR8055-201ENST00000610739 97 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 AL442067.1-201ENST00000613261 223 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 MIR6740-201ENST00000618268 113 ntBASIC0.53□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.262-201ENST00000364641 102 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.288-201ENST00000364854 92 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 SNORD12C-201ENST00000386307 89 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 AC113410.1-201ENST00000505029 247 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 Y_RNA.680-201ENST00000516441 93 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
NKX2-6A6NCS4 MIR4771-2-201ENST00000577758 74 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 245.4 ms