Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 RNU6-938P-201ENST00000411285 103 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 AF228730.3-201ENST00000436691 102 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
CLIC4Q9Y696 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
CLIC4Q9Y696 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.1□□□□□ -2.23
CLIC4Q9Y696 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CLIC4Q9Y696 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CLIC4Q9Y696 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
CLIC4Q9Y696 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.09□□□□□ -2.23
CLIC4Q9Y696 Y_RNA.23-201ENST00000362496 106 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 Y_RNA.75-201ENST00000362927 97 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 SNORA27-201ENST00000384323 126 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 RNU6-918P-201ENST00000391219 106 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 RNU7-90P-201ENST00000459216 62 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 SNORA18.4-201ENST00000516440 124 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 MTND1P7-201ENST00000632801 297 ntBASIC1.09□□□□□ -2.23
CLIC4Q9Y696 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
CLIC4Q9Y696 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CLIC4Q9Y696 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLIC4Q9Y696 RNU6-1189P-201ENST00000383958 107 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 RNU6-643P-201ENST00000384018 107 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 AL392103.1-201ENST00000447000 198 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 RNU7-67P-201ENST00000459003 62 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 snoU13.16-201ENST00000459350 104 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 SNORD116-25-201ENST00000516517 92 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 SNORD36C-201ENST00000516733 66 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 MIR378D2-201ENST00000580636 98 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 snoU13.31-201ENST00000607291 104 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
CLIC4Q9Y696 MIR1302-7-201ENST00000408841 72 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 RPS29P24-201ENST00000486345 171 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 MIR2115-201ENST00000516657 100 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 RNU7-53P-201ENST00000516705 60 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 MRPS18CP4-201ENST00000535821 231 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 MIR548AO-201ENST00000579992 96 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 AL365205.2-201ENST00000594586 68 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 AC078938.1-201ENST00000620993 318 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
CLIC4Q9Y696 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.412-201ENST00000384001 104 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 SNORA1-201ENST00000384107 130 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.494-201ENST00000384432 111 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.06□□□□□ -2.24
CLIC4Q9Y696 RNU7-73P-201ENST00000458743 63 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 RNU7-96P-201ENST00000459535 64 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 RNA5SP458-201ENST00000516188 119 ntBASIC1.06□□□□□ -2.24
CLIC4Q9Y696 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-978P-201ENST00000364371 103 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.274-201ENST00000364714 101 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.297-201ENST00000364950 91 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-396P-201ENST00000365369 105 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-1292P-201ENST00000383856 107 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 SNORD77.3-201ENST00000391113 65 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-388P-201ENST00000517012 105 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-389P-201ENST00000517048 105 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.05□□□□□ -2.24
CLIC4Q9Y696 U6.106-201ENST00000636360 105 ntBASIC1.05□□□□□ -2.24
CLIC4Q9Y696 RNU6-200P-201ENST00000364743 107 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 RNU6-47P-201ENST00000383866 107 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.440-201ENST00000384120 114 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 AL138752.1-201ENST00000452964 351 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 MIR3129-201ENST00000581095 76 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 MIR5197-201ENST00000583721 112 ntBASIC1.04□□□□□ -2.24
CLIC4Q9Y696 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.233-201ENST00000364407 101 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 AL035398.1-201ENST00000430869 322 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.644-201ENST00000459006 113 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 RNU6-998P-201ENST00000515894 101 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.674-201ENST00000516362 113 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 Y_RNA.700-201ENST00000516806 100 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.03□□□□□ -2.24
CLIC4Q9Y696 MIR4431-201ENST00000579990 94 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 AC072026.1-201ENST00000605023 201 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 MIR6516-201ENST00000630554 81 ntBASIC1.03□□□□□ -2.24
CLIC4Q9Y696 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.03□□□□□ -2.24
CLIC4Q9Y696 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CLIC4Q9Y696 RNU6-312P-201ENST00000364629 107 ntBASIC1.02□□□□□ -2.25
CLIC4Q9Y696 MT-TN-201ENST00000387400 73 ntBASIC1.02□□□□□ -2.25
CLIC4Q9Y696 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.02□□□□□ -2.25
CLIC4Q9Y696 AL359821.1-201ENST00000605519 182 ntBASIC1.02□□□□□ -2.25
CLIC4Q9Y696 MIR377-201ENST00000362145 69 ntBASIC1.01□□□□□ -2.25
CLIC4Q9Y696 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms