Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-23P-201ENST00000363283 107 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 RNU7-67P-201ENST00000459003 62 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 MIR4791-201ENST00000607666 84 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 SEPT14P17-201ENST00000617978 177 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 MIR6717-201ENST00000622747 73 ntBASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NUCKS1Q9H1E3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 SNORA11.4-201ENST00000408823 129 ntBASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 RNA5SP261-201ENST00000410536 106 ntBASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 RPS29P29-201ENST00000456396 171 ntBASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 RNU7-2P-201ENST00000516096 62 ntBASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.97□□□□□ -1.93
NUCKS1Q9H1E3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
NUCKS1Q9H1E3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
NUCKS1Q9H1E3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
NUCKS1Q9H1E3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 SNORA24-201ENST00000384096 131 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 MIR516B2-201ENST00000385190 85 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 AL445685.2-201ENST00000422551 342 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 HSPE1P9-201ENST00000440046 311 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 AL020996.3-201ENST00000606617 222 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 AL365361.1-201ENST00000566942 3481 ntBASIC2.96□□□□□ -1.94
NUCKS1Q9H1E3 SNORD38.1-201ENST00000363863 68 ntBASIC2.95□□□□□ -1.94
NUCKS1Q9H1E3 SNORD115-27-201ENST00000364430 82 ntBASIC2.95□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-913P-201ENST00000390913 95 ntBASIC2.95□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.95□□□□□ -1.94
NUCKS1Q9H1E3 MIR7106-201ENST00000612419 65 ntBASIC2.95□□□□□ -1.94
NUCKS1Q9H1E3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 RNA5SP168-201ENST00000516642 112 ntBASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 MIR4712-201ENST00000583750 82 ntBASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.94□□□□□ -1.94
NUCKS1Q9H1E3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 SNORA67.1-201ENST00000364749 141 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 MIR206-201ENST00000384872 86 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 RNU7-73P-201ENST00000458743 63 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 RN7SKP132-201ENST00000516001 208 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 RNA5SP82-201ENST00000516707 92 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 AC079600.2-201ENST00000550076 130 ntBASIC2.93□□□□□ -1.94
NUCKS1Q9H1E3 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 MIR34C-201ENST00000384831 77 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AL034345.1-201ENST00000407768 123 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 RNU7-12P-201ENST00000516030 62 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AC069114.2-201ENST00000604699 304 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 AC005336.3-201ENST00000623833 2679 ntBASIC2.92□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-524P-201ENST00000384270 107 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 MIR452-201ENST00000385020 85 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 AC087499.2-201ENST00000432861 149 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 RPS29P28-201ENST00000446439 141 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 GTF3AP2-201ENST00000557014 266 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 AC005786.1-201ENST00000588553 154 ntBASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
NUCKS1Q9H1E3 RNU6-457P-201ENST00000363999 107 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-342P-201ENST00000384521 104 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 MIR136-201ENST00000385207 82 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 SNORD28B-201ENST00000390993 75 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 AL161932.1-201ENST00000437408 146 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 SNORA31.11-201ENST00000516528 139 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 AC243994.1-201ENST00000618627 109 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 SNORD3E-202ENST00000627253 216 ntBASIC2.9□□□□□ -1.95
NUCKS1Q9H1E3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 SNORD115-3-201ENST00000363100 82 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 Y_RNA.567-201ENST00000384736 106 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 AL138827.1-201ENST00000402666 306 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 HMGN1P33-201ENST00000432945 451 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 MIR548AR-201ENST00000582191 57 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 MIR5092-201ENST00000583139 88 ntBASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.89□□□□□ -1.95
NUCKS1Q9H1E3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 SNORA5B-201ENST00000363786 132 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-1229P-201ENST00000364295 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms