Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3□□□□□ -1.93
USB1Q9BQ65 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 SNORD38B-202ENST00000625943 69 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3□□□□□ -1.93
USB1Q9BQ65 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
USB1Q9BQ65 HSBP1P2-201ENST00000299671 229 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USB1Q9BQ65 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 RNA5SP237-201ENST00000410414 113 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 RNA5SP501-201ENST00000410990 112 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 RPL23AP83-201ENST00000434984 473 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 SNORA25.13-201ENST00000516395 103 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 IGKV2-26-201ENST00000518305 343 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
USB1Q9BQ65 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
USB1Q9BQ65 RNA5SP383-201ENST00000362934 120 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 RNA5SP133-201ENST00000363368 119 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 SNORA38-201ENST00000363946 132 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 SNORA38.1-201ENST00000364172 131 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 Y_RNA.545-201ENST00000384652 105 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 NDUFB4P4-201ENST00000404822 243 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 RNA5SP120-201ENST00000410900 112 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 AC025518.1-201ENST00000479856 347 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 AC090255.1-201ENST00000495779 349 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 RPS29P11-201ENST00000496507 171 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 AC022149.2-201ENST00000621061 203 ntBASIC2.98□□□□□ -1.93
USB1Q9BQ65 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USB1Q9BQ65 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
USB1Q9BQ65 AC009487.2-201ENST00000420969 6821 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USB1Q9BQ65 RNVU1-14-201ENST00000384770 164 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 AC105272.1-201ENST00000438604 198 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 AC027119.1-201ENST00000440877 241 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 SNORA70.24-201ENST00000517233 118 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 AC141846.1-201ENST00000568348 142 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 MIR4276-201ENST00000584832 70 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 MIR8066-201ENST00000617280 78 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.97□□□□□ -1.93
USB1Q9BQ65 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USB1Q9BQ65 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
USB1Q9BQ65 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
USB1Q9BQ65 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.96□□□□□ -1.93
USB1Q9BQ65 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
USB1Q9BQ65 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
USB1Q9BQ65 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USB1Q9BQ65 MIR208A-201ENST00000362287 71 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 RNU4-32P-201ENST00000363404 141 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 SNORD56.3-201ENST00000363507 71 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 MIR490-201ENST00000384865 128 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 AC019129.1-201ENST00000403786 261 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 AC005326.1-201ENST00000429197 123 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 RNU6-917P-201ENST00000516294 104 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 MIR4251-201ENST00000635819 61 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.96□□□□□ -1.94
USB1Q9BQ65 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.95□□□□□ -1.94
USB1Q9BQ65 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
USB1Q9BQ65 Y_RNA.333-201ENST00000365274 102 ntBASIC2.95□□□□□ -1.94
USB1Q9BQ65 SNORD4B-201ENST00000459083 72 ntBASIC2.95□□□□□ -1.94
USB1Q9BQ65 AC104027.1-201ENST00000521887 300 ntBASIC2.95□□□□□ -1.94
USB1Q9BQ65 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.95□□□□□ -1.94
USB1Q9BQ65 AP000753.3-201ENST00000604083 169 ntBASIC2.95□□□□□ -1.94
USB1Q9BQ65 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
USB1Q9BQ65 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
USB1Q9BQ65 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
USB1Q9BQ65 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USB1Q9BQ65 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USB1Q9BQ65 RNU6-1094P-201ENST00000362416 104 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 RNU6-478P-201ENST00000363904 110 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 RNY1P2-201ENST00000364820 117 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 MIR483-201ENST00000385070 76 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 HMGN2P39-201ENST00000398005 273 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
USB1Q9BQ65 BX510359.1-201ENST00000456973 237 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 MIR3935-201ENST00000583472 104 ntBASIC2.94□□□□□ -1.94
USB1Q9BQ65 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.94□□□□□ -1.94
USB1Q9BQ65 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
USB1Q9BQ65 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USB1Q9BQ65 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
USB1Q9BQ65 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
USB1Q9BQ65 Y_RNA.57-201ENST00000362806 113 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 RNU1-138P-201ENST00000384093 164 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 AL450471.1-201ENST00000447509 127 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 MIR2276-201ENST00000516886 89 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 AL662814.1-201ENST00000617364 121 ntBASIC2.93□□□□□ -1.94
USB1Q9BQ65 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
USB1Q9BQ65 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
USB1Q9BQ65 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.92□□□□□ -1.94
USB1Q9BQ65 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USB1Q9BQ65 MIR491-201ENST00000384877 84 ntBASIC2.92□□□□□ -1.94
USB1Q9BQ65 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
USB1Q9BQ65 MIR5680-201ENST00000577577 84 ntBASIC2.92□□□□□ -1.94
USB1Q9BQ65 AC090897.1-201ENST00000580909 226 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms