Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AL359821.1-201ENST00000605519 182 ntBASIC1.06□□□□□ -2.24
SMARCE1Q969G3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
SMARCE1Q969G3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SMARCE1Q969G3 SNORA1-201ENST00000384107 130 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 SNORA40.5-201ENST00000391061 128 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 RNU6-197P-201ENST00000516680 100 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.05□□□□□ -2.24
SMARCE1Q969G3 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 MIR4308-201ENST00000580634 81 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 RNU2-4P-201ENST00000606190 192 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 AC134878.1-201ENST00000619901 243 ntBASIC1.05□□□□□ -2.24
SMARCE1Q969G3 RNU6-728P-201ENST00000365375 104 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 SNORA27-201ENST00000384323 126 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 AC090844.1-201ENST00000422019 156 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 RNU7-67P-201ENST00000459003 62 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 AC107297.1-201ENST00000459991 176 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.04□□□□□ -2.24
SMARCE1Q969G3 MIR4744-201ENST00000581563 82 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 MIR376A2-201ENST00000636782 80 ntBASIC1.04□□□□□ -2.24
SMARCE1Q969G3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
SMARCE1Q969G3 RNU6-103P-201ENST00000363686 107 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 SNORA20.1-201ENST00000364790 130 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RNU6-913P-201ENST00000390913 95 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.03□□□□□ -2.24
SMARCE1Q969G3 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RNU6-958P-201ENST00000516995 106 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SMARCE1Q969G3 RNU6-94P-201ENST00000607728 107 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 AC108706.1-201ENST00000611053 297 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
SMARCE1Q969G3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SMARCE1Q969G3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 MIR200A-201ENST00000384875 90 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 RNU6-578P-201ENST00000390980 103 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 SNORD77.3-201ENST00000391113 65 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 MIR942-201ENST00000401111 86 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 RNU4-43P-201ENST00000410628 137 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 snoU13.16-201ENST00000459350 104 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 UBL5P1-201ENST00000507979 193 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 RNU4-71P-201ENST00000516258 113 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 MIR2115-201ENST00000516657 100 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
SMARCE1Q969G3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 RNY1-201ENST00000364228 113 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 RNU6-396P-201ENST00000365369 105 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 AL121914.1-201ENST00000450188 156 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 RPS29P24-201ENST00000486345 171 ntBASIC1.01□□□□□ -2.25
SMARCE1Q969G3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
SMARCE1Q969G3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMARCE1Q969G3 RNA5SP432-201ENST00000362480 116 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.440-201ENST00000384120 114 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 AL603825.1-201ENST00000438481 80 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 AL138752.1-201ENST00000452964 351 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1□□□□□ -2.25
SMARCE1Q969G3 MIR3129-201ENST00000581095 76 ntBASIC1□□□□□ -2.25
SMARCE1Q969G3 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 SNORD113.3-201ENST00000364630 78 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.571-201ENST00000384753 98 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 SNORA79-201ENST00000408376 140 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 RNU7-73P-201ENST00000458743 63 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 AC004817.2-201ENST00000561794 651 ntBASIC0.99□□□□□ -2.25
SMARCE1Q969G3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SMARCE1Q969G3 RNY1P10-201ENST00000363268 113 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.121-201ENST00000363309 113 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 RNU6-205P-201ENST00000390858 107 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 SNORD111-201ENST00000408139 94 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.98□□□□□ -2.25
SMARCE1Q969G3 AL035398.1-201ENST00000430869 322 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 HMGN1P33-201ENST00000432945 451 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 RNU6-998P-201ENST00000515894 101 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.797-201ENST00000515977 94 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 MIR8055-201ENST00000610739 97 ntBASIC0.98□□□□□ -2.25
SMARCE1Q969G3 Y_RNA.182-201ENST00000363880 111 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 RNU6-978P-201ENST00000364371 103 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SMARCE1Q969G3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 AC244023.1-201ENST00000426884 112 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.97□□□□□ -2.25
SMARCE1Q969G3 RNU7-96P-201ENST00000459535 64 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
SMARCE1Q969G3 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
SMARCE1Q969G3 AC013244.2-201ENST00000603396 103 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 352.1 ms