Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 MIR4251-201ENST00000635819 61 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNU6-151P-201ENST00000364158 107 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNU4-11P-201ENST00000365287 132 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNU6-998P-201ENST00000515894 101 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 RNU6-255P-201ENST00000516957 105 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 Y_RNA.778-201ENST00000620203 90 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 MTND1P7-201ENST00000632801 297 ntBASIC1.25□□□□□ -2.21
SHFQ7M4L6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SHFQ7M4L6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SHFQ7M4L6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 SNORA25.3-201ENST00000363205 127 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 Y_RNA.170-201ENST00000363746 110 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 SNORD37.2-201ENST00000391075 66 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 AC009474.2-201ENST00000451383 136 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 RNU7-67P-201ENST00000459003 62 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 AP003716.2-201ENST00000528260 108 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SHFQ7M4L6 AL645939.4-201ENST00000604495 135 ntBASIC1.24□□□□□ -2.21
SHFQ7M4L6 SNORA70.7-201ENST00000384159 133 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 RNU7-96P-201ENST00000459535 64 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 RNU6-958P-201ENST00000516995 106 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 AC112693.2-201ENST00000556538 232 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 MIR548AO-201ENST00000579992 96 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 AC131055.1-201ENST00000584626 316 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 MTND5P32-201ENST00000560711 1802 ntBASIC1.23□□□□□ -2.21
SHFQ7M4L6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
SHFQ7M4L6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
SHFQ7M4L6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 RNU6-913P-201ENST00000390913 95 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 MIR1302-7-201ENST00000408841 72 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 AL035398.1-201ENST00000430869 322 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 SNORD13-201ENST00000459299 104 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.22□□□□□ -2.21
SHFQ7M4L6 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
SHFQ7M4L6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
SHFQ7M4L6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.22□□□□□ -2.21
SHFQ7M4L6 MIR342-201ENST00000362212 99 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 MIR1185-1-201ENST00000408598 86 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNU7-73P-201ENST00000458743 63 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNU7-197P-201ENST00000458836 62 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNU2-11P-201ENST00000459191 187 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 snoU13.26-201ENST00000459452 105 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNU7-200P-201ENST00000516105 62 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 RNU2-60P-201ENST00000517290 128 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 MIR3945-201ENST00000581853 98 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 AC091932.4-201ENST00000623386 200 ntBASIC1.21□□□□□ -2.22
SHFQ7M4L6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHFQ7M4L6 Y_RNA.400-201ENST00000383963 111 ntBASIC1.2□□□□□ -2.22
SHFQ7M4L6 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
SHFQ7M4L6 RNA5SP236-201ENST00000516169 116 ntBASIC1.2□□□□□ -2.22
SHFQ7M4L6 RNU7-53P-201ENST00000516705 60 ntBASIC1.2□□□□□ -2.22
SHFQ7M4L6 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 MIR1289-2-201ENST00000408360 111 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 AL392103.1-201ENST00000447000 198 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 RNU7-80P-201ENST00000459562 61 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 AL596211.1-201ENST00000569873 2277 ntBASIC1.19□□□□□ -2.22
SHFQ7M4L6 Y_RNA.215-201ENST00000364204 112 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 RNU6-1062P-201ENST00000383908 107 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 Y_RNA.506-201ENST00000384494 102 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 Y_RNA.584-201ENST00000391090 114 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 RNU6-1190P-201ENST00000410811 104 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 RNU6-548P-201ENST00000517083 115 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 AL020996.3-201ENST00000606617 222 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 MIR8055-201ENST00000610739 97 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
SHFQ7M4L6 RNU1-133P-201ENST00000364867 167 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 MIR569-201ENST00000385228 96 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 MIR513C-201ENST00000401352 84 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 RNU7-45P-201ENST00000459460 63 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms