Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA31.2-201ENST00000516019 134 ntBASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 MIR4431-201ENST00000579990 94 ntBASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
SYNE3Q6ZMZ3 Y_RNA.240-201ENST00000364469 95 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 SNORA40.5-201ENST00000391061 128 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 AL591704.2-201ENST00000421658 181 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 MIR378D2-201ENST00000580636 98 ntBASIC1.34□□□□□ -2.19
SYNE3Q6ZMZ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 AF228730.3-201ENST00000436691 102 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 AL392103.1-201ENST00000447000 198 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA18.4-201ENST00000516440 124 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA81.3-201ENST00000517283 198 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 AP003484.1-201ENST00000530974 250 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 AP002392.1-201ENST00000537692 208 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 MIR4791-201ENST00000607666 84 ntBASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.33□□□□□ -2.2
SYNE3Q6ZMZ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-597P-201ENST00000365620 102 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA1-201ENST00000384107 130 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 SNORD77.3-201ENST00000391113 65 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 RPS26P48-201ENST00000491713 339 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 SNORD116-25-201ENST00000516517 92 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 MIR4251-201ENST00000635819 61 ntBASIC1.32□□□□□ -2.2
SYNE3Q6ZMZ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 RNA5SP264-201ENST00000363115 107 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-682P-201ENST00000363843 106 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 MIR1185-1-201ENST00000408598 86 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 AC022559.1-201ENST00000520905 205 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 MIR5197-201ENST00000583721 112 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 MIR376A2-201ENST00000636782 80 ntBASIC1.31□□□□□ -2.2
SYNE3Q6ZMZ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-1318P-201ENST00000365389 103 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA51.10-201ENST00000384418 136 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 MIR1285-1-201ENST00000408593 84 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 RNU2-64P-201ENST00000411315 191 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 RNU7-73P-201ENST00000458743 63 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 RNU11-2P-201ENST00000516898 142 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 MIR3671-201ENST00000580455 88 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 AL022345.2-201ENST00000606307 135 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 AC091895.1-201ENST00000624494 256 ntBASIC1.3□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA70.7-201ENST00000384159 133 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA27-201ENST00000384323 126 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 AC004792.1-201ENST00000614523 137 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 AC243994.1-201ENST00000618627 109 ntBASIC1.29□□□□□ -2.2
SYNE3Q6ZMZ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 snoU13.16-201ENST00000459350 104 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 RNU7-96P-201ENST00000459535 64 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 AC107297.1-201ENST00000459991 176 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 RPS29P24-201ENST00000486345 171 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 RNU7-121P-201ENST00000516604 62 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 MTND1P7-201ENST00000632801 297 ntBASIC1.28□□□□□ -2.2
SYNE3Q6ZMZ3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 RNU4-84P-201ENST00000364200 139 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 MIR570-201ENST00000384917 97 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA75.2-201ENST00000391138 150 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA75.3-201ENST00000391231 150 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms