Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 SEPT7P4-201ENST00000437076 306 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 SNORD116-25-201ENST00000516517 92 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 MIR103A2-201ENST00000362154 78 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 Y_RNA.29-201ENST00000362570 113 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-312P-201ENST00000364629 107 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 SNORA27-201ENST00000384323 126 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 AC108667.1-201ENST00000428618 249 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-861P-201ENST00000516745 106 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 MIR4498-201ENST00000577599 66 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 MIR5197-201ENST00000583721 112 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 AC004792.1-201ENST00000614523 137 ntBASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
PPP4R4Q6NUP7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 AC006461.1-201ENST00000412637 326 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
PPP4R4Q6NUP7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 MIR337-201ENST00000362281 93 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 RNU7-21P-201ENST00000459430 62 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 RPS29P24-201ENST00000486345 171 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 RNU6-794P-201ENST00000517261 64 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 snoU13.31-201ENST00000607291 104 ntBASIC1.42□□□□□ -2.18
PPP4R4Q6NUP7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 AC063976.4-201ENST00000421971 163 ntBASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 MTND5P15-201ENST00000434246 349 ntBASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.41□□□□□ -2.18
PPP4R4Q6NUP7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-597P-201ENST00000365620 102 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-768P-201ENST00000384683 107 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 SNORA17.3-201ENST00000391159 129 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 AC074198.2-201ENST00000508153 258 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-998P-201ENST00000515894 101 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 SCARNA15-202ENST00000516881 127 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 MIR3671-201ENST00000580455 88 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 MIR6516-201ENST00000630554 81 ntBASIC1.4□□□□□ -2.19
PPP4R4Q6NUP7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 RNU4-84P-201ENST00000364200 139 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 RNU7-73P-201ENST00000458743 63 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 AC107297.1-201ENST00000459991 176 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-958P-201ENST00000516995 106 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 SEPT14P17-201ENST00000617978 177 ntBASIC1.39□□□□□ -2.19
PPP4R4Q6NUP7 MIR624-201ENST00000385217 97 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 RNU7-67P-201ENST00000459003 62 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 snoU13.16-201ENST00000459350 104 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 RNU7-96P-201ENST00000459535 64 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.38□□□□□ -2.19
PPP4R4Q6NUP7 Y_RNA.393-201ENST00000383936 102 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 PCNPP3-201ENST00000393579 471 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNA5SP127-201ENST00000411051 133 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNA5SP247-201ENST00000411181 105 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNU2-64P-201ENST00000411315 191 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 AC005840.1-201ENST00000498412 377 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 AC107027.2-201ENST00000512197 115 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 RNU11-2P-201ENST00000516898 142 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 MIR8055-201ENST00000610739 97 ntBASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
PPP4R4Q6NUP7 AC008163.1-202ENST00000636004 2889 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-125P-201ENST00000384505 107 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 HMGN1P33-201ENST00000432945 451 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 298.1 ms