Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU2-70P-201ENST00000410718 179 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 RPS26P45-201ENST00000471748 340 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC13P31276 AC010598.1-201ENST00000510378 103 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 RNU7-116P-201ENST00000516940 62 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 SNORD114-7-201ENST00000362520 77 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RNU6-674P-201ENST00000363831 107 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 Y_RNA.280-201ENST00000364765 112 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 SNORD58C-201ENST00000365223 64 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RNA5SP109-201ENST00000391010 116 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RNU6-1186P-201ENST00000410429 97 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 snoU13.18-201ENST00000459483 104 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RNU2-60P-201ENST00000517290 128 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 RPL23AP91-201ENST00000569211 455 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 MIR5582-201ENST00000579697 68 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 AC131055.1-201ENST00000584626 316 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HOXC13P31276 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.55□□□□□ -2.16
HOXC13P31276 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 MIR302D-201ENST00000362275 68 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 Y_RNA.634-201ENST00000364811 113 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 Y_RNA.309-201ENST00000365046 111 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 RNY4P30-201ENST00000410216 95 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 RNU2-55P-201ENST00000411146 174 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 Y_RNA.651-201ENST00000459380 103 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 RPS27P22-201ENST00000478056 241 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 MIR4452-201ENST00000583004 71 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 U6.73-201ENST00000619194 103 ntBASIC1.54□□□□□ -2.16
HOXC13P31276 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.54□□□□□ -2.16
HOXC13P31276 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.54□□□□□ -2.16
HOXC13P31276 SNORA25.8-201ENST00000364831 128 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 SNORA72-201ENST00000384339 132 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 Y_RNA.495-201ENST00000384435 112 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 AL603914.1-201ENST00000401964 204 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 Y_RNA.617-201ENST00000410920 90 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 Y_RNA.649-201ENST00000459077 103 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 RN7SKP19-201ENST00000516016 252 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 RNU7-99P-201ENST00000516271 62 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 SNORA18.4-201ENST00000516440 124 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 RNU1-92P-201ENST00000517017 135 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 uc_338.28-201ENST00000612082 187 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 Pinc.1-201ENST00000616452 154 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 uc_338.4-201ENST00000616635 176 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 RMST_2.1-201ENST00000617263 136 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 U6.108-201ENST00000637764 58 ntBASIC1.53□□□□□ -2.16
HOXC13P31276 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXC13P31276 RNU6-1209P-201ENST00000363655 107 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 Y_RNA.203-201ENST00000364106 102 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 RNU6-647P-201ENST00000364243 107 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 RNU6-117P-201ENST00000365415 107 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 RNU6-939P-201ENST00000384634 107 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 MIR194-1-201ENST00000384892 85 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 MIR1263-201ENST00000408324 86 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 RN7SKP200-201ENST00000410564 320 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 SNX2P2-201ENST00000424553 323 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 RPS4XP11-201ENST00000446897 772 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 AL031737.1-201ENST00000450125 223 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 AC023449.1-201ENST00000454464 154 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 SNORD77.4-201ENST00000516158 81 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 AL022345.2-201ENST00000606307 135 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 AC025166.1-201ENST00000612411 163 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 MTND5P18-201ENST00000445624 1801 ntBASIC1.52□□□□□ -2.17
HOXC13P31276 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HOXC13P31276 MIR26B-201ENST00000362251 77 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 Y_RNA.52-201ENST00000362760 96 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 Y_RNA.191-201ENST00000363972 113 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 Y_RNA.486-201ENST00000384398 107 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 Y_RNA.540-201ENST00000384638 111 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 RNU7-94P-201ENST00000459576 63 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 RNA5SP153-201ENST00000516498 76 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 RNU7-149P-201ENST00000516739 59 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 RNU6-537P-201ENST00000517277 103 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 AL160236.1-201ENST00000556317 195 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 AC091178.2-201ENST00000584401 117 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 AC006435.5-201ENST00000624486 112 ntBASIC1.51□□□□□ -2.17
HOXC13P31276 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC13P31276 Y_RNA.346-201ENST00000365385 112 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU6-32P-201ENST00000383948 107 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU6-13P-201ENST00000384248 107 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU6-880P-201ENST00000384526 107 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU6-12P-201ENST00000384604 107 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 RNU6-41P-201ENST00000384741 107 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HOXC13P31276 Y_RNA.621-201ENST00000411065 96 ntBASIC1.5□□□□□ -2.17
HOXC13P31276 SNORD11-201ENST00000459124 84 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms