Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 RNU1-23P-201ENST00000363361 144 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 RNA5SP99-201ENST00000364020 114 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 Y_RNA.426-201ENST00000384068 113 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 SNORA67.3-201ENST00000384366 140 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 RNU6-679P-201ENST00000391003 106 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 RNA5SP445-201ENST00000515889 115 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 SNORA31.4-201ENST00000516049 129 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 AL356280.1-201ENST00000603614 379 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 UCA1.1-201ENST00000620952 75 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 MIR6766-201ENST00000622641 72 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 AC021613.1-201ENST00000623880 111 ntBASIC2.78□□□□□ -1.96
HOXA10P31260 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
HOXA10P31260 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HOXA10P31260 SNORA27-201ENST00000384323 126 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 RNA5SP323-201ENST00000391094 133 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 RNA5SP482-201ENST00000391269 118 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 AL023284.1-201ENST00000403956 276 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 MIR1287-201ENST00000408492 90 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 RNU4-69P-201ENST00000410677 143 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 POLR2J4-204ENST00000418424 324 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 RNU7-96P-201ENST00000459535 64 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 AC139453.2-201ENST00000487255 133 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 RNU6-998P-201ENST00000515894 101 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.77□□□□□ -1.97
HOXA10P31260 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HOXA10P31260 AL442644.1-201ENST00000454390 3105 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA10P31260 RNU6-1201P-201ENST00000384227 107 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 SNORA8-201ENST00000384574 139 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA10P31260 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA10P31260 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.76□□□□□ -1.97
HOXA10P31260 RPL23AP63-201ENST00000498752 471 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 RNA5SP458-201ENST00000516188 119 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 RNA5SP200-201ENST00000516360 103 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 RNU7-28P-201ENST00000516759 62 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 MIR4668-201ENST00000582284 70 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 MIR4439-201ENST00000583746 80 ntBASIC2.76□□□□□ -1.97
HOXA10P31260 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA10P31260 SNORD115-2-201ENST00000362842 82 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 SNORD115-20-201ENST00000365099 82 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 RNU2-40P-201ENST00000410833 196 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 SNX2P2-201ENST00000424553 323 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HOXA10P31260 AL163195.1-201ENST00000496941 348 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 AC121758.2-201ENST00000553271 193 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 AL513534.2-201ENST00000603836 250 ntBASIC2.75□□□□□ -1.97
HOXA10P31260 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HOXA10P31260 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
HOXA10P31260 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXA10P31260 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXA10P31260 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXA10P31260 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXA10P31260 MIR342-201ENST00000362212 99 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-34-201ENST00000362441 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-12-201ENST00000362583 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-29-201ENST00000362834 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-9-201ENST00000362912 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-21-201ENST00000362963 81 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-14-201ENST00000363090 81 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-41-201ENST00000363608 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-11-201ENST00000363616 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-5-201ENST00000363633 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-39-201ENST00000363694 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD116-10-201ENST00000363791 102 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-4-201ENST00000363810 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-6-201ENST00000363942 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-42-201ENST00000364273 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 RNU6-776P-201ENST00000364403 104 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-15-201ENST00000364809 81 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 RNU6-1022P-201ENST00000365049 104 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-26-201ENST00000365067 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-10-201ENST00000365073 81 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-43-201ENST00000365503 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD115-36-201ENST00000365629 82 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SNORD38C-201ENST00000384381 69 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 Y_RNA.508-201ENST00000384502 114 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 MIR218-1-201ENST00000384999 110 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 U8.13-201ENST00000390842 128 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 SRIP3-201ENST00000413200 219 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 CST2P1-201ENST00000425770 87 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXA10P31260 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXA10P31260 ZNF355P-201ENST00000427301 3216 ntBASIC2.74□□□□□ -1.97
HOXA10P31260 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA10P31260 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA10P31260 SNORA11.4-201ENST00000408823 129 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 SNORA7.5-201ENST00000410672 110 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 RNU2-63P-201ENST00000410792 194 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 ATP5J2P3-201ENST00000451550 258 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 RPL23AP42-201ENST00000471152 471 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 Y_RNA.659-201ENST00000515994 113 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 SCARNA16.3-201ENST00000516595 184 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 IGLV3-17-201ENST00000519099 244 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 MIR3199-1-201ENST00000582434 88 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 AL353997.5-201ENST00000618886 171 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 AC006160.2-201ENST00000637708 154 ntBASIC2.73□□□□□ -1.97
HOXA10P31260 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXA10P31260 SNORD58A-201ENST00000383875 65 ntBASIC2.72□□□□□ -1.97
HOXA10P31260 Y_RNA.467-201ENST00000384297 102 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 363 ms