Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RN7SKP132-201ENST00000516001 208 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 RNA5SP437-201ENST00000517249 129 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 AC096720.1-201ENST00000604441 183 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 AC021506.2-201ENST00000612354 169 ntBASIC2.71□□□□□ -1.98
NFKB1P19838 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.71□□□□□ -1.98
NFKB1P19838 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NFKB1P19838 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NFKB1P19838 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NFKB1P19838 Y_RNA.73-201ENST00000362910 113 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 SNORD115-35-201ENST00000365122 82 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 Y_RNA.467-201ENST00000384297 102 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 MIR526A1-201ENST00000384897 85 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 MIR660-201ENST00000385235 97 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 SNORA48.1-201ENST00000390879 135 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 RNU6-972P-201ENST00000391208 107 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 HMGN2P35-201ENST00000412164 270 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 HMGN2P3-201ENST00000433603 273 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 HMGN2P5-201ENST00000436882 273 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 RPL39P39-201ENST00000455840 151 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 EIF4BP1-201ENST00000554881 351 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.7□□□□□ -1.98
NFKB1P19838 MIR4439-201ENST00000583746 80 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 AL033523.1-201ENST00000605153 153 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 AL512310.12-203ENST00000640543 90 ntBASIC2.7□□□□□ -1.98
NFKB1P19838 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 SNORA32-201ENST00000384072 121 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 RNU6-242P-201ENST00000384359 107 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 SNORD116-22-201ENST00000384430 92 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 MIR518A2-201ENST00000384966 87 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 RNU2-40P-201ENST00000410833 196 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 RNA5SP225-201ENST00000410874 135 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.69□□□□□ -1.98
NFKB1P19838 AC108729.3-201ENST00000513484 108 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 RNA5SP395-201ENST00000516567 118 ntBASIC2.69□□□□□ -1.98
NFKB1P19838 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
NFKB1P19838 Y_RNA.190-201ENST00000363964 101 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 RNU6-497P-201ENST00000365316 104 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 RNU6-1276P-201ENST00000365372 104 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 Y_RNA.537-201ENST00000384626 109 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 RNU6-402P-201ENST00000410678 103 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 RNU2-7P-201ENST00000410794 178 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 SUB1P4-201ENST00000566062 339 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 MIR4709-201ENST00000577272 72 ntBASIC2.68□□□□□ -1.98
NFKB1P19838 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NFKB1P19838 RNU6-296P-201ENST00000384608 107 ntBASIC2.67□□□□□ -1.98
NFKB1P19838 AC099513.1-201ENST00000490423 301 ntBASIC2.67□□□□□ -1.98
NFKB1P19838 GTF3AP2-201ENST00000557014 266 ntBASIC2.67□□□□□ -1.98
NFKB1P19838 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
NFKB1P19838 RNU6-112P-201ENST00000363599 104 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 RNU6-219P-201ENST00000364728 107 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NFKB1P19838 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.66□□□□□ -1.98
NFKB1P19838 snoU13.27-201ENST00000459278 104 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 RNU6-826P-201ENST00000516827 104 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 ELOCP29-201ENST00000588193 334 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 SNORD3E-202ENST00000627253 216 ntBASIC2.66□□□□□ -1.98
NFKB1P19838 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.66□□□□□ -1.98
NFKB1P19838 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NFKB1P19838 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.65□□□□□ -1.98
NFKB1P19838 MIR1255A-201ENST00000408338 113 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 AC090844.1-201ENST00000422019 156 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 HMGN1P33-201ENST00000432945 451 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 SNORD109B-201ENST00000458961 67 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 SNORD109A-201ENST00000459128 67 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
NFKB1P19838 RNU7-2P-201ENST00000516096 62 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 RNA5SP481-201ENST00000516814 122 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 MIR5588-201ENST00000581890 63 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 AC006023.1-201ENST00000603944 259 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 MIR376B-201ENST00000614515 100 ntBASIC2.65□□□□□ -1.99
NFKB1P19838 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NFKB1P19838 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.65□□□□□ -1.99
NFKB1P19838 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.65□□□□□ -1.99
NFKB1P19838 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NFKB1P19838 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NFKB1P19838 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NFKB1P19838 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NFKB1P19838 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NFKB1P19838 SNORA5B-201ENST00000363786 132 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 SNORD116-10-201ENST00000363791 102 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 RNU6-979P-201ENST00000383896 107 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 RNU6-813P-201ENST00000384691 107 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 RNU6-1067P-201ENST00000384752 107 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 HMGN2P39-201ENST00000398005 273 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 snoU13.16-201ENST00000459350 104 ntBASIC2.64□□□□□ -1.99
NFKB1P19838 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.64□□□□□ -1.99
NFKB1P19838 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NFKB1P19838 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NFKB1P19838 MIR424-201ENST00000362227 98 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RNU6-301P-201ENST00000384277 107 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 U8.15-201ENST00000390947 134 ntBASIC2.63□□□□□ -1.99
NFKB1P19838 RNA5SP501-201ENST00000410990 112 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 564.6 ms