Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RNA5SP133-201ENST00000363368 119 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 SNORD115-44-201ENST00000365391 82 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 AL590004.1-201ENST00000405321 300 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 AF228730.4-201ENST00000421457 183 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 RNU7-74P-201ENST00000459104 62 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 MTND2P14-201ENST00000482139 351 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.3□□□□□ -2.62
CCL3L1P16619 ZNF519P2-201ENST00000557032 169 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 MIR3165-201ENST00000579874 75 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 AC097520.1-201ENST00000624435 385 ntBASIC-1.3□□□□□ -2.62
CCL3L1P16619 FGF7P2-201ENST00000332473 296 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR302B-201ENST00000362188 73 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR342-201ENST00000362212 99 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR517B-201ENST00000385102 67 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR518B-201ENST00000385127 83 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 SNORA36B-201ENST00000410438 131 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MTND2P39-201ENST00000457230 764 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 RNU6-261P-201ENST00000459506 102 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 RNU7-149P-201ENST00000516739 59 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 RNU2-31P-201ENST00000516954 155 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MTCO2P4-201ENST00000517968 247 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 AP000676.1-201ENST00000533307 52 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR548H5-201ENST00000580314 60 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 MIR4306-201ENST00000583390 91 ntBASIC-1.31□□□□□ -2.62
CCL3L1P16619 SNORD115-2-201ENST00000362842 82 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 RNA5SP192-201ENST00000364404 120 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 SNORD64-201ENST00000386683 67 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 MT-TY-201ENST00000387409 66 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CCL3L1P16619 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 AC023449.1-201ENST00000454464 154 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 MIR3920-201ENST00000581751 86 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.32□□□□□ -2.62
CCL3L1P16619 AC069503.3-201ENST00000618674 145 ntBASIC-1.32□□□□□ -2.62
CCL3L1P16619 MIR409-201ENST00000362237 79 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 RNU6-431P-201ENST00000383874 107 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 AC098826.2-201ENST00000452011 651 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCL3L1P16619 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 RNU6-693P-201ENST00000516134 107 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 RNA5SP33-201ENST00000516687 98 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.33□□□□□ -2.62
CCL3L1P16619 YWHAEP2-201ENST00000580066 112 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 RNU6-89P-201ENST00000606519 100 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 AC024933.1-201ENST00000608472 348 ntBASIC-1.33□□□□□ -2.62
CCL3L1P16619 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNU6-449P-201ENST00000383914 107 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNU6-154P-201ENST00000384306 106 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 SNORA18-201ENST00000384416 132 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 MIR587-201ENST00000384845 96 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNU6-311P-201ENST00000516224 102 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 RNA5SP67-201ENST00000516422 131 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 MIR3115-201ENST00000577915 68 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 U6.109-201ENST00000636749 87 ntBASIC-1.34□□□□□ -2.62
CCL3L1P16619 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 RNY3P10-201ENST00000384764 102 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 MIR599-201ENST00000385069 95 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.35□□□□□ -2.63
CCL3L1P16619 AC091951.2-201ENST00000500762 203 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 RNU6-256P-201ENST00000516747 97 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 MIR3672-201ENST00000584290 82 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 RNU7-10P-201ENST00000607194 63 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 DISC2.1-201ENST00000612827 205 ntBASIC-1.35□□□□□ -2.63
CCL3L1P16619 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 RNU6-20P-201ENST00000384106 107 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 RNU6-842P-201ENST00000384269 107 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 MIR548A2-201ENST00000384956 97 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 SNORA40.4-201ENST00000390971 128 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.36□□□□□ -2.63
CCL3L1P16619 snoU13.13-201ENST00000458842 104 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 RNU7-55P-201ENST00000459426 62 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 AC083798.1-201ENST00000472671 131 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 AC022137.1-201ENST00000483735 151 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 SNORD22.1-201ENST00000516331 125 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 MIR548AE1-201ENST00000583292 70 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 AC005014.2-201ENST00000607795 599 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 AC027449.1-201ENST00000608890 407 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 MIR382-201ENST00000637119 76 ntBASIC-1.36□□□□□ -2.63
CCL3L1P16619 RNU6-626P-201ENST00000363354 107 ntBASIC-1.37□□□□□ -2.63
CCL3L1P16619 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms