Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.10-201ENST00000362371 110 ntBASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 RNU4-67P-201ENST00000364569 141 ntBASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 RNA5SP501-201ENST00000410990 112 ntBASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 MIR4777-201ENST00000583710 86 ntBASIC3.18□□□□□ -1.9
CSB-PGBD3P0DP91 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-1276P-201ENST00000365372 104 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-409P-201ENST00000384114 104 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 SNORA27-201ENST00000384323 126 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 AL451046.2-201ENST00000403074 277 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 POLR2J4-204ENST00000418424 324 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 STAG3L5P-204ENST00000443759 179 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 AC114811.1-201ENST00000507207 168 ntBASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.17□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.190-201ENST00000363964 101 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-998P-201ENST00000515894 101 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 RNU7-193P-201ENST00000516723 65 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 SNORA31.25-201ENST00000517242 134 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 MIR5092-201ENST00000583139 88 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 AC021613.1-201ENST00000623880 111 ntBASIC3.16□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-1125P-201ENST00000363601 107 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 Y_RNA.221-201ENST00000364248 96 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 Y_RNA.241-201ENST00000364470 117 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-675P-201ENST00000384236 104 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-679P-201ENST00000391003 106 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-482P-201ENST00000391068 107 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 AL022718.1-201ENST00000412004 84 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 HMGN2P35-201ENST00000412164 270 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 AL035398.1-201ENST00000430869 322 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RPS12P2-201ENST00000439728 269 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RNU7-45P-201ENST00000459460 63 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 SNORA31.10-201ENST00000516482 106 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-267P-201ENST00000516714 103 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 SUB1P4-201ENST00000566062 339 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 SNORA28-201ENST00000606769 126 ntBASIC3.15□□□□□ -1.91
CSB-PGBD3P0DP91 AC092881.1-201ENST00000638218 2733 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 Y_RNA.171-201ENST00000363760 102 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-60P-201ENST00000364792 103 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 MIR520A-201ENST00000384862 85 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 SNORA7.5-201ENST00000410672 110 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-402P-201ENST00000410678 103 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-1258P-201ENST00000516911 111 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 MIR4529-201ENST00000578110 78 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 MIR4446-201ENST00000578505 67 ntBASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSB-PGBD3P0DP91 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 Y_RNA.244-201ENST00000364484 109 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 RNU1-51P-201ENST00000365345 176 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-950P-201ENST00000384651 107 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 RNU2-7P-201ENST00000410794 178 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 HSPE1P9-201ENST00000440046 311 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-548P-201ENST00000517083 115 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 U1.36-201ENST00000620684 176 ntBASIC3.13□□□□□ -1.91
CSB-PGBD3P0DP91 MIRLET7C-201ENST00000362160 84 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-979P-201ENST00000383896 107 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-242P-201ENST00000384359 107 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD38C-201ENST00000384381 69 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 RNA5SP450-201ENST00000411206 102 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 MIR1270-201ENST00000459320 83 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 RNU7-96P-201ENST00000459535 64 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 AC090821.2-201ENST00000523552 176 ntBASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
CSB-PGBD3P0DP91 AC016717.2-201ENST00000609089 5141 ntBASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-35-201ENST00000365122 82 ntBASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 MRPL35P3-201ENST00000421557 364 ntBASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 RNU7-181P-201ENST00000517234 74 ntBASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.11□□□□□ -1.91
CSB-PGBD3P0DP91 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-112P-201ENST00000363599 104 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 Y_RNA.467-201ENST00000384297 102 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-616P-201ENST00000384353 107 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-163P-201ENST00000384396 106 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 SNORA18-201ENST00000384416 132 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RNU4-69P-201ENST00000410677 143 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RNU2-11P-201ENST00000459191 187 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 RPL23AP63-201ENST00000498752 471 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 MIR5588-201ENST00000581890 63 ntBASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CSB-PGBD3P0DP91 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-34-201ENST00000362441 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-12-201ENST00000362583 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-29-201ENST00000362834 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-9-201ENST00000362912 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-21-201ENST00000362963 81 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-14-201ENST00000363090 81 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms