Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4662B-201ENST00000579498 81 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 MIR4423-201ENST00000580922 80 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 AC005357.1-201ENST00000588399 301 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 AL356055.1-201ENST00000602528 446 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 RNU6-490P-201ENST00000362985 107 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 RNY3P4-201ENST00000384428 101 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 MIR548A2-201ENST00000384956 97 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
CXCL1P09341 RNA5SP484-201ENST00000458857 111 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 AC021146.6-201ENST00000514659 117 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 RNU6-531P-201ENST00000516694 104 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 MTND3P12-201ENST00000559068 328 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 AL162413.1-201ENST00000603198 110 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 AL021707.8-201ENST00000609428 183 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 MIR3662-201ENST00000637030 95 ntBASIC-1.16□□□□□ -2.6
CXCL1P09341 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 RNU6-865P-201ENST00000364772 107 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 SNORD78.2-201ENST00000391076 69 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 RNU6-908P-201ENST00000410160 94 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 AL160004.2-201ENST00000432935 350 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 MTATP6P23-201ENST00000440153 476 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.17□□□□□ -2.6
CXCL1P09341 RNU6-693P-201ENST00000516134 107 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 DEFB131E-201ENST00000532329 154 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 NBR2-204ENST00000587322 63 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 AL050303.3-201ENST00000613704 284 ntBASIC-1.17□□□□□ -2.6
CXCL1P09341 MIR302B-201ENST00000362188 73 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 RNY1P13-201ENST00000365030 105 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 MIR196A1-201ENST00000388006 70 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 MIR1265-201ENST00000408444 86 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.18□□□□□ -2.6
CXCL1P09341 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 RNU6-566P-201ENST00000516790 107 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 AC092794.2-201ENST00000620933 563 ntBASIC-1.18□□□□□ -2.6
CXCL1P09341 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 RNU6-455P-201ENST00000384681 107 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 MIR2053-201ENST00000459295 91 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 AL512360.1-201ENST00000555346 234 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 DEFB117-201ENST00000602356 141 ntBASIC-1.19□□□□□ -2.6
CXCL1P09341 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU6-888P-201ENST00000363010 101 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 SNORA72.4-201ENST00000384174 132 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR635-201ENST00000384830 98 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU6-332P-201ENST00000391193 108 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU7-45P-201ENST00000459460 63 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU6-126P-201ENST00000516685 103 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU7-188P-201ENST00000517063 64 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNA5SP169-201ENST00000517268 117 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR548AX-201ENST00000580117 73 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR1244-1-201ENST00000612829 85 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 AL359880.1-201ENST00000621879 266 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR1244-3-201ENST00000635744 85 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR6863-201ENST00000636112 90 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR1244-2-201ENST00000636449 85 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 MIR1244-4-202ENST00000636813 85 ntBASIC-1.2□□□□□ -2.6
CXCL1P09341 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 SNORD61-201ENST00000384252 73 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 SNORD83B-201ENST00000386745 93 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 SNORD77.4-201ENST00000516158 81 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 AC005014.3-201ENST00000605985 190 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 MIR6841-201ENST00000637129 72 ntBASIC-1.21□□□□□ -2.6
CXCL1P09341 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.22□□□□□ -2.6
CXCL1P09341 RNU6-451P-201ENST00000362921 107 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 RNU6-593P-201ENST00000364716 112 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 RNU6-144P-201ENST00000383951 107 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 MIR181B2-201ENST00000385004 89 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 SNORA69.1-201ENST00000390904 137 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 AL603914.1-201ENST00000401964 204 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.22□□□□□ -2.6
CXCL1P09341 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.22□□□□□ -2.6
CXCL1P09341 AC005899.2-201ENST00000584353 90 ntBASIC-1.22□□□□□ -2.6
CXCL1P09341 SNORD81.1-201ENST00000363064 77 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 RNY3P3-201ENST00000363816 102 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 RNU6-35P-201ENST00000384530 107 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 MIR626-201ENST00000385032 94 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms