Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC109347.2-201ENST00000610220 349 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 AC122108.2-201ENST00000611946 526 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 AC104010.1-201ENST00000616889 150 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MIR3674-201ENST00000636576 68 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MIR548K-201ENST00000408406 116 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNA5SP261-201ENST00000410536 106 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 MIR4770-201ENST00000579149 58 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 AC006566.1-201ENST00000608943 513 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 AC072046.2-201ENST00000618366 268 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNY1P2-201ENST00000364820 117 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 MIRLET7B-201ENST00000385140 83 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNU6-913P-201ENST00000390913 95 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 MIR548I2-201ENST00000408348 149 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 AC084290.1-201ENST00000434995 374 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 RNU7-45P-201ENST00000459460 63 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 SNORA40.17-201ENST00000517256 115 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.07□□□□□ -2.58
SPTA1P02549 MIR3139-201ENST00000579145 76 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 MIR6502-201ENST00000617296 76 ntBASIC-1.07□□□□□ -2.58
SPTA1P02549 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU4-75P-201ENST00000364621 146 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU6-476P-201ENST00000384726 107 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 MIR652-201ENST00000385278 98 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU4-83P-201ENST00000410863 133 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU2-61P-201ENST00000411069 191 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 MTCO2P29-201ENST00000465212 189 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 AC245884.10-201ENST00000597355 337 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 SNORD115-32-201ENST00000364079 82 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 MIR539-201ENST00000365690 78 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU6-809P-201ENST00000384461 107 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 AC008507.2-201ENST00000588402 1176 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNU6-489P-201ENST00000618289 107 ntBASIC-1.08□□□□□ -2.58
SPTA1P02549 RNY1P13-201ENST00000365030 105 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU6-108P-201ENST00000365558 107 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 CYCSP46-201ENST00000423569 204 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 TPTE2P5-203ENST00000458118 728 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 MTATP6P15-201ENST00000527233 835 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 AC018714.1-201ENST00000605028 208 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU7-10P-201ENST00000607194 63 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 SNORD115-23-201ENST00000364461 82 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU6-312P-201ENST00000364629 107 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 MIR527-201ENST00000385244 85 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 MIR8485-201ENST00000401372 91 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.09□□□□□ -2.58
SPTA1P02549 AC004223.4-201ENST00000612426 332 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 AC079248.2-201ENST00000623779 326 ntBASIC-1.09□□□□□ -2.58
SPTA1P02549 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 MIR889-201ENST00000401280 79 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 AC008507.4-201ENST00000585464 127 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 MIR147A-201ENST00000385079 72 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 AL606923.1-201ENST00000406616 190 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 AL603910.2-201ENST00000407268 136 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 AC141846.1-201ENST00000568348 142 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 MIR3920-201ENST00000581751 86 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 AC092794.2-201ENST00000620933 563 ntBASIC-1.1□□□□□ -2.59
SPTA1P02549 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-961P-201ENST00000363893 105 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-606P-201ENST00000384721 111 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 MIR548O-201ENST00000408583 114 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 MIR1278-201ENST00000408753 81 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 MIR4308-201ENST00000580634 81 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC005357.1-201ENST00000588399 301 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC073534.2-201ENST00000620377 381 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AL138960.2-201ENST00000625145 535 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-208P-201ENST00000362431 107 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 SNORD114-17-201ENST00000364699 75 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-169P-201ENST00000365336 107 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNY3P9-201ENST00000384727 106 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC009961.2-201ENST00000435771 251 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AL353813.1-201ENST00000440700 253 ntBASIC-1.11□□□□□ -2.59
SPTA1P02549 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms