Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC087499.4-201ENST00000448505 178 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 RNU6-1143P-201ENST00000516125 104 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 SNORA18.4-201ENST00000516440 124 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 SNORD36C-201ENST00000516733 66 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 AC100767.1-201ENST00000528178 123 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 MIR4264-201ENST00000583520 66 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 AP000942.4-201ENST00000604811 241 ntBASIC0.5□□□□□ -2.33
TRIM3O75382 Y_RNA.37-201ENST00000362606 108 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 Y_RNA.117-201ENST00000363294 101 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 RNU6-1289P-201ENST00000384431 106 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 MIR598-201ENST00000384868 97 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 MIR520H-201ENST00000385126 88 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 HMGN1P33-201ENST00000432945 451 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 AL731563.1-201ENST00000442202 214 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 RNU7-62P-201ENST00000458856 62 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 SERF1AP1-201ENST00000514575 187 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 RNU6-1338P-201ENST00000516328 91 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 RNU6-570P-201ENST00000517051 105 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 MIR4662B-201ENST00000579498 81 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
TRIM3O75382 UBE2WP1-201ENST00000362030 340 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 Y_RNA.202-201ENST00000364083 110 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 Y_RNA.229-201ENST00000364347 113 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 SNORA27-201ENST00000384323 126 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 SNORA8.3-201ENST00000384679 139 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 MIR548A2-201ENST00000384956 97 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 SNORA40.5-201ENST00000391061 128 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 AL138752.1-201ENST00000452964 351 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 RNU6-365P-201ENST00000517113 106 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 uc_338.6-201ENST00000613544 171 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
TRIM3O75382 PVT1_3.1-201ENST00000620853 95 ntBASIC0.48□□□□□ -2.33
TRIM3O75382 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
TRIM3O75382 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 MIR4676-201ENST00000583078 72 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 AC020891.4-201ENST00000605745 93 ntBASIC0.47□□□□□ -2.33
TRIM3O75382 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.47□□□□□ -2.33
TRIM3O75382 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.47□□□□□ -2.33
TRIM3O75382 RNU6-1309P-201ENST00000363305 108 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 SNORD24-201ENST00000383884 75 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 SNORD38B-201ENST00000384690 67 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 MIR626-201ENST00000385032 94 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 RNU6-1203P-201ENST00000410703 110 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 RNU7-73P-201ENST00000458743 63 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 RPS29P24-201ENST00000486345 171 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 AL356055.1-201ENST00000602528 446 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 MIR8055-201ENST00000610739 97 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 SNORD38B-202ENST00000625943 69 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 AC010332.2-201ENST00000613083 1904 ntBASIC0.46□□□□□ -2.34
TRIM3O75382 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.45□□□□□ -2.34
TRIM3O75382 MIR342-201ENST00000362212 99 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNU6-888P-201ENST00000363010 101 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 MT-TT-201ENST00000387460 66 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNA5SP193-201ENST00000410353 107 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNU6-1190P-201ENST00000410811 104 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 AC113618.1-201ENST00000416747 285 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 AF228730.3-201ENST00000436691 102 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.45□□□□□ -2.34
TRIM3O75382 RNU6-504P-201ENST00000516568 104 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNU6-229P-201ENST00000516614 102 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 RNU7-53P-201ENST00000516705 60 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.45□□□□□ -2.34
TRIM3O75382 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 MIR4804-201ENST00000581683 73 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 Z83818.1-201ENST00000603584 150 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 MIR6740-201ENST00000618268 113 ntBASIC0.45□□□□□ -2.34
TRIM3O75382 Y_RNA.7-201ENST00000362352 102 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 Y_RNA.91-201ENST00000363042 107 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 RNU6-797P-201ENST00000363101 109 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 Y_RNA.275-201ENST00000364726 110 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 RNU6-740P-201ENST00000364734 105 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 MIR588-201ENST00000384900 83 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 RNU6-985P-201ENST00000410182 104 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 RNU2-70P-201ENST00000410718 179 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 Y_RNA.622-201ENST00000411091 108 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.44□□□□□ -2.34
TRIM3O75382 RNU6-1299P-201ENST00000516316 100 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 MIR3612-201ENST00000579753 87 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 MIR5688-201ENST00000580619 83 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 Z97988.1-201ENST00000637697 135 ntBASIC0.44□□□□□ -2.34
TRIM3O75382 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 SNORA33.2-201ENST00000365413 134 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 Y_RNA.512-201ENST00000384518 102 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 RNU6-651P-201ENST00000411040 105 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 RNU6-177P-201ENST00000411257 104 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 RNU2-11P-201ENST00000459191 187 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 Y_RNA.701-201ENST00000516812 110 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.43□□□□□ -2.34
TRIM3O75382 MIR18A-201ENST00000362310 71 ntBASIC0.42□□□□□ -2.34
TRIM3O75382 Y_RNA.44-201ENST00000362676 108 ntBASIC0.42□□□□□ -2.34
TRIM3O75382 Y_RNA.66-201ENST00000362862 102 ntBASIC0.42□□□□□ -2.34
TRIM3O75382 Y_RNA.237-201ENST00000364439 102 ntBASIC0.42□□□□□ -2.34
TRIM3O75382 SNORA1.1-201ENST00000364671 133 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms