Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 RNU7-67P-201ENST00000459003 62 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RNU6-504P-201ENST00000516568 104 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RNU6-958P-201ENST00000516995 106 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 MIR3128-201ENST00000581957 66 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RMST_2.1-201ENST00000617263 136 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RNU6-888P-201ENST00000363010 101 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 RNU4-17P-201ENST00000365598 141 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 AC090844.1-201ENST00000422019 156 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 SNORA18.4-201ENST00000516440 124 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 AC036111.3-201ENST00000526389 112 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 AP003484.1-201ENST00000530974 250 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 AL078603.1-201ENST00000603824 313 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 AC062037.2-201ENST00000610137 73 ntBASIC0.95□□□□□ -2.26
TSPAN1O60635 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
TSPAN1O60635 RNU6-923P-201ENST00000364753 107 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 RNY4P28-201ENST00000365281 93 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 SNORA1-201ENST00000384107 130 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 RNU2-55P-201ENST00000411146 174 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.94□□□□□ -2.26
TSPAN1O60635 AC107297.1-201ENST00000459991 176 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 AL020996.3-201ENST00000606617 222 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 U4.1-201ENST00000620349 87 ntBASIC0.94□□□□□ -2.26
TSPAN1O60635 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
TSPAN1O60635 SNORD115-34-201ENST00000362441 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 Y_RNA.23-201ENST00000362496 106 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-12-201ENST00000362583 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-29-201ENST00000362834 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-9-201ENST00000362912 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-21-201ENST00000362963 81 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-14-201ENST00000363090 81 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-13-201ENST00000363358 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-41-201ENST00000363608 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-11-201ENST00000363616 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-5-201ENST00000363633 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-39-201ENST00000363694 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-4-201ENST00000363810 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-16-201ENST00000363887 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-6-201ENST00000363942 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-42-201ENST00000364273 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-15-201ENST00000364809 81 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-1-201ENST00000364961 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-26-201ENST00000365067 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-10-201ENST00000365073 81 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 Y_RNA.350-201ENST00000365409 98 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-43-201ENST00000365503 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-36-201ENST00000365629 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 RNY3P5-201ENST00000384127 102 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 AC087499.4-201ENST00000448505 178 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 AL138752.1-201ENST00000452964 351 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 RNU11-2P-201ENST00000516898 142 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 SNORD115-40-201ENST00000606510 82 ntBASIC0.93□□□□□ -2.26
TSPAN1O60635 Y_RNA.60-201ENST00000362831 98 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNU6-1335P-201ENST00000365426 107 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNU6-196P-201ENST00000384315 107 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 SNORA27-201ENST00000384323 126 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 SNORA2B-201ENST00000384583 137 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNU6-913P-201ENST00000390913 95 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 SNORA40.5-201ENST00000391061 128 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.92□□□□□ -2.26
TSPAN1O60635 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.92□□□□□ -2.26
TSPAN1O60635 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNA5SP220-201ENST00000516298 104 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNA5SP153-201ENST00000516498 76 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 AP000942.4-201ENST00000604811 241 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 RNU2-4P-201ENST00000606190 192 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 AC134878.1-201ENST00000619901 243 ntBASIC0.92□□□□□ -2.26
TSPAN1O60635 Y_RNA.118-201ENST00000363300 101 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 Y_RNA.193-201ENST00000363979 102 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 Y_RNA.307-201ENST00000365022 117 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 RNU6-396P-201ENST00000365369 105 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 SNORA24-201ENST00000384096 131 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 RNU6-126P-201ENST00000516685 103 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
TSPAN1O60635 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
TSPAN1O60635 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TSPAN1O60635 Y_RNA.20-201ENST00000362479 113 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 SNORD113.3-201ENST00000364630 78 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 Y_RNA.447-201ENST00000384184 113 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 SNORD77.3-201ENST00000391113 65 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 Y_RNA.626-201ENST00000411288 95 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 HMGN1P33-201ENST00000432945 451 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 snoU13.18-201ENST00000459483 104 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 RNU6-111P-201ENST00000517179 105 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 MIR4308-201ENST00000580634 81 ntBASIC0.9□□□□□ -2.27
TSPAN1O60635 MIR3129-201ENST00000581095 76 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms