Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORA74.3-201ENST00000517108 154 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 AC004812.1-201ENST00000540773 146 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 MIR6852-201ENST00000621699 66 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPHS1O60500 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NPHS1O60500 Y_RNA.344-201ENST00000365381 112 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-1319P-201ENST00000390855 104 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-913P-201ENST00000390913 95 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-747P-201ENST00000390928 104 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-241P-201ENST00000391148 104 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNA5SP89-201ENST00000410300 108 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-177P-201ENST00000411257 104 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 AC004965.1-201ENST00000413033 213 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU7-53P-201ENST00000516705 60 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
NPHS1O60500 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPHS1O60500 RNU6-1298P-201ENST00000362456 101 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 Y_RNA.171-201ENST00000363760 102 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 RNU6-439P-201ENST00000384188 106 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 Y_RNA.500-201ENST00000384466 111 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 MIR548D2-201ENST00000384955 97 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 RNU6-168P-201ENST00000516189 101 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 RNU6-1258P-201ENST00000516911 111 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 DEFB122-202ENST00000569013 197 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 MIR3163-201ENST00000581592 73 ntBASIC2.1□□□□□ -2.07
NPHS1O60500 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.1□□□□□ -2.07
NPHS1O60500 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.07
NPHS1O60500 Y_RNA.163-201ENST00000363702 113 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RNU6-1014P-201ENST00000383940 103 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 Y_RNA.531-201ENST00000384589 121 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 Y_RNA.537-201ENST00000384626 109 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 SNORA26.6-201ENST00000391256 115 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RNU7-73P-201ENST00000458743 63 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RPL39P34-201ENST00000477141 156 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 RNU7-6P-201ENST00000516845 62 ntBASIC2.09□□□□□ -2.07
NPHS1O60500 Y_RNA.49-201ENST00000362714 112 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 U8.6-201ENST00000364939 135 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 Y_RNA.323-201ENST00000365157 109 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 AL161935.2-201ENST00000414627 60 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 UBE2DNL-203ENST00000474922 222 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 MIR3152-201ENST00000579801 74 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 AL020996.3-201ENST00000606617 222 ntBASIC2.08□□□□□ -2.08
NPHS1O60500 SNORA22.1-201ENST00000362701 134 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 Y_RNA.495-201ENST00000384435 112 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 HMGN1P33-201ENST00000432945 451 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RPS23P4-201ENST00000487908 423 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 MIR4672-201ENST00000583126 81 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 AL513534.2-201ENST00000603836 250 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 RNU6-94P-201ENST00000607728 107 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 MIR6717-201ENST00000622747 73 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 MIR6841-201ENST00000637129 72 ntBASIC2.07□□□□□ -2.08
NPHS1O60500 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPHS1O60500 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NPHS1O60500 RNU6-32P-201ENST00000383948 107 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 RNU6-13P-201ENST00000384248 107 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 SNORA51.10-201ENST00000384418 136 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 RNU6-12P-201ENST00000384604 107 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 RNU6-41P-201ENST00000384741 107 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NPHS1O60500 JTBP1-201ENST00000441314 247 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 RNA5SP233-201ENST00000459153 113 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 RNU7-113P-201ENST00000459273 62 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 AC068339.1-201ENST00000526965 141 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 DNAJC19P9-201ENST00000555084 351 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 MIR4764-201ENST00000580680 88 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 AC087741.2-201ENST00000619415 172 ntBASIC2.06□□□□□ -2.08
NPHS1O60500 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NPHS1O60500 RNU6-756P-201ENST00000383997 107 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 Y_RNA.470-201ENST00000384307 117 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 MIR520C-201ENST00000385005 87 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 MIR653-201ENST00000385279 96 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NPHS1O60500 MIR1302-5-201ENST00000408164 150 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.05□□□□□ -2.08
NPHS1O60500 RNU7-43P-201ENST00000516554 64 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 MIR5009-201ENST00000578736 100 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 AC008133.2-201ENST00000624540 351 ntBASIC2.05□□□□□ -2.08
NPHS1O60500 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPHS1O60500 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
NPHS1O60500 RNU6-766P-201ENST00000362478 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms