Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SNORD115-13-201ENST00000363358 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-41-201ENST00000363608 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-11-201ENST00000363616 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-5-201ENST00000363633 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-39-201ENST00000363694 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-4-201ENST00000363810 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-16-201ENST00000363887 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-6-201ENST00000363942 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-42-201ENST00000364273 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-15-201ENST00000364809 81 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-1-201ENST00000364961 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-26-201ENST00000365067 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-10-201ENST00000365073 81 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-43-201ENST00000365503 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-36-201ENST00000365629 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 RNU6-493P-201ENST00000391321 108 ntBASIC1.01□□□□□ -2.25
SSX4O60224 RNU6-1023P-201ENST00000516137 106 ntBASIC1.01□□□□□ -2.25
SSX4O60224 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
SSX4O60224 AP003484.1-201ENST00000530974 250 ntBASIC1.01□□□□□ -2.25
SSX4O60224 MIR548AO-201ENST00000579992 96 ntBASIC1.01□□□□□ -2.25
SSX4O60224 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SNORD115-40-201ENST00000606510 82 ntBASIC1.01□□□□□ -2.25
SSX4O60224 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSX4O60224 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SSX4O60224 RNU6-103P-201ENST00000363686 107 ntBASIC1□□□□□ -2.25
SSX4O60224 SNORA20.1-201ENST00000364790 130 ntBASIC1□□□□□ -2.25
SSX4O60224 RNU6-728P-201ENST00000365375 104 ntBASIC1□□□□□ -2.25
SSX4O60224 Y_RNA.626-201ENST00000411288 95 ntBASIC1□□□□□ -2.25
SSX4O60224 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
SSX4O60224 SNORA18.4-201ENST00000516440 124 ntBASIC1□□□□□ -2.25
SSX4O60224 SNORD36C-201ENST00000516733 66 ntBASIC1□□□□□ -2.25
SSX4O60224 RNU6-111P-201ENST00000517179 105 ntBASIC1□□□□□ -2.25
SSX4O60224 MIR4744-201ENST00000581563 82 ntBASIC1□□□□□ -2.25
SSX4O60224 AC097639.2-201ENST00000603159 172 ntBASIC1□□□□□ -2.25
SSX4O60224 RMST_2.1-201ENST00000617263 136 ntBASIC1□□□□□ -2.25
SSX4O60224 AC134878.1-201ENST00000619901 243 ntBASIC1□□□□□ -2.25
SSX4O60224 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
SSX4O60224 RNU6-923P-201ENST00000364753 107 ntBASIC0.99□□□□□ -2.25
SSX4O60224 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
SSX4O60224 SNORA40.5-201ENST00000391061 128 ntBASIC0.99□□□□□ -2.25
SSX4O60224 AF228730.3-201ENST00000436691 102 ntBASIC0.99□□□□□ -2.25
SSX4O60224 RNU7-67P-201ENST00000459003 62 ntBASIC0.99□□□□□ -2.25
SSX4O60224 RNU4-71P-201ENST00000516258 113 ntBASIC0.99□□□□□ -2.25
SSX4O60224 RNU6-197P-201ENST00000516680 100 ntBASIC0.99□□□□□ -2.25
SSX4O60224 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.99□□□□□ -2.25
SSX4O60224 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
SSX4O60224 AP000942.4-201ENST00000604811 241 ntBASIC0.99□□□□□ -2.25
SSX4O60224 MIR6516-201ENST00000630554 81 ntBASIC0.99□□□□□ -2.25
SSX4O60224 Y_RNA.23-201ENST00000362496 106 ntBASIC0.98□□□□□ -2.25
SSX4O60224 RNU6-654P-201ENST00000364373 107 ntBASIC0.98□□□□□ -2.25
SSX4O60224 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
SSX4O60224 SNORA24-201ENST00000384096 131 ntBASIC0.98□□□□□ -2.25
SSX4O60224 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
SSX4O60224 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
SSX4O60224 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.98□□□□□ -2.25
SSX4O60224 AC004817.2-201ENST00000561794 651 ntBASIC0.98□□□□□ -2.25
SSX4O60224 RNU2-4P-201ENST00000606190 192 ntBASIC0.98□□□□□ -2.25
SSX4O60224 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SSX4O60224 Y_RNA.7-201ENST00000362352 102 ntBASIC0.97□□□□□ -2.25
SSX4O60224 RNU1-93P-201ENST00000364704 169 ntBASIC0.97□□□□□ -2.25
SSX4O60224 SNORA27-201ENST00000384323 126 ntBASIC0.97□□□□□ -2.25
SSX4O60224 SNORA79-201ENST00000408376 140 ntBASIC0.97□□□□□ -2.25
SSX4O60224 AL121914.1-201ENST00000450188 156 ntBASIC0.97□□□□□ -2.25
SSX4O60224 RNU6-958P-201ENST00000516995 106 ntBASIC0.97□□□□□ -2.25
SSX4O60224 MIR4308-201ENST00000580634 81 ntBASIC0.97□□□□□ -2.25
SSX4O60224 AC131055.1-201ENST00000584626 316 ntBASIC0.97□□□□□ -2.25
SSX4O60224 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
SSX4O60224 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSX4O60224 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
SSX4O60224 RNU6-396P-201ENST00000365369 105 ntBASIC0.96□□□□□ -2.26
SSX4O60224 SNORA1-201ENST00000384107 130 ntBASIC0.96□□□□□ -2.26
SSX4O60224 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
SSX4O60224 RNU6-578P-201ENST00000390980 103 ntBASIC0.96□□□□□ -2.26
SSX4O60224 RNU4-43P-201ENST00000410628 137 ntBASIC0.96□□□□□ -2.26
SSX4O60224 snoU13.16-201ENST00000459350 104 ntBASIC0.96□□□□□ -2.26
SSX4O60224 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
SSX4O60224 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SSX4O60224 AC108706.1-201ENST00000611053 297 ntBASIC0.96□□□□□ -2.26
SSX4O60224 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.96□□□□□ -2.26
SSX4O60224 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.95□□□□□ -2.26
SSX4O60224 RNY1-201ENST00000364228 113 ntBASIC0.95□□□□□ -2.26
SSX4O60224 Y_RNA.410-201ENST00000383992 113 ntBASIC0.95□□□□□ -2.26
SSX4O60224 RNA5SP95-201ENST00000410319 137 ntBASIC0.95□□□□□ -2.26
SSX4O60224 RNU6-613P-201ENST00000410412 108 ntBASIC0.95□□□□□ -2.26
SSX4O60224 RPS29P24-201ENST00000486345 171 ntBASIC0.95□□□□□ -2.26
SSX4O60224 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
SSX4O60224 Y_RNA.797-201ENST00000515977 94 ntBASIC0.95□□□□□ -2.26
SSX4O60224 AC036111.3-201ENST00000526389 112 ntBASIC0.95□□□□□ -2.26
SSX4O60224 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
SSX4O60224 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
SSX4O60224 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SSX4O60224 Y_RNA.121-201ENST00000363309 113 ntBASIC0.94□□□□□ -2.26
SSX4O60224 RNU6-1189P-201ENST00000383958 107 ntBASIC0.94□□□□□ -2.26
SSX4O60224 Y_RNA.571-201ENST00000384753 98 ntBASIC0.94□□□□□ -2.26
SSX4O60224 SNORD77.3-201ENST00000391113 65 ntBASIC0.94□□□□□ -2.26
SSX4O60224 MIR942-201ENST00000401111 86 ntBASIC0.94□□□□□ -2.26
SSX4O60224 MIR3129-201ENST00000581095 76 ntBASIC0.94□□□□□ -2.26
SSX4O60224 AC106800.4-201ENST00000614905 153 ntBASIC0.94□□□□□ -2.26
SSX4O60224 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SSX4O60224 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms