Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 MTND5P18-201ENST00000445624 1801 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 SNORA16B-201ENST00000364674 135 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 RNU6-215P-201ENST00000365169 102 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 MIR583-201ENST00000384846 75 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 MIR17-201ENST00000385012 84 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 AC022254.1-201ENST00000567857 235 ntBASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
TMEM88BA6NKF7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 SNORD20-201ENST00000384550 80 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.649-201ENST00000459077 103 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 MIR4299-201ENST00000577899 72 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 MIR548AR-201ENST00000582191 57 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 AC243994.1-201ENST00000618627 109 ntBASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.630-201ENST00000411370 108 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 RNU7-164P-201ENST00000459221 62 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 TRMT112P2-201ENST00000512910 132 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 SNORD33.1-201ENST00000516213 88 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 RNU6-958P-201ENST00000516995 106 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 AC002984.1-201ENST00000591692 448 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.62□□□□□ -1.99
TMEM88BA6NKF7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 SNORA51.10-201ENST00000384418 136 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 AL022718.1-201ENST00000412004 84 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 MIR4305-201ENST00000583252 102 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 AL357312.1-201ENST00000603879 298 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 AL359821.1-201ENST00000605519 182 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 MIR6733-201ENST00000635723 61 ntBASIC2.61□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.81-201ENST00000362997 102 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 SNORA24-201ENST00000384096 131 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 MIR570-201ENST00000384917 97 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 MIR520C-201ENST00000385005 87 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 RNA5SP344-201ENST00000411081 104 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 BTF3P4-201ENST00000418852 495 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 IGKV1-22-201ENST00000524313 326 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 MIR4791-201ENST00000607666 84 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 AC021613.1-201ENST00000623880 111 ntBASIC2.6□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.198-201ENST00000364013 98 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.298-201ENST00000364960 107 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 SNORD116-21-201ENST00000384507 92 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 MIR653-201ENST00000385279 96 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 AC019129.1-201ENST00000403786 261 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 AL161935.2-201ENST00000414627 60 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 AL035461.1-201ENST00000421490 332 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 RNU7-73P-201ENST00000458743 63 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 RNA5SP233-201ENST00000459153 113 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 snoU13.16-201ENST00000459350 104 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 RNU2-13P-201ENST00000515909 113 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 RNU6-917P-201ENST00000516294 104 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 RNY4P20-201ENST00000516678 93 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 MIR6132-201ENST00000622083 109 ntBASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.59□□□□□ -1.99
TMEM88BA6NKF7 Y_RNA.494-201ENST00000384432 111 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 RNU6-880P-201ENST00000384526 107 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 RNU6-412P-201ENST00000516434 106 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 RNA5SP82-201ENST00000516707 92 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 MIR4764-201ENST00000580680 88 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.58□□□□□ -2
TMEM88BA6NKF7 MIR6129-201ENST00000616087 109 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.58□□□□□ -2
TMEM88BA6NKF7 ZNF355P-201ENST00000427301 3216 ntBASIC2.58□□□□□ -2
TMEM88BA6NKF7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.57□□□□□ -2
TMEM88BA6NKF7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TMEM88BA6NKF7 RNU4-16P-201ENST00000364737 141 ntBASIC2.57□□□□□ -2
TMEM88BA6NKF7 SNORD28B-201ENST00000390993 75 ntBASIC2.57□□□□□ -2
TMEM88BA6NKF7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.57□□□□□ -2
TMEM88BA6NKF7 RNA5SP200-201ENST00000516360 103 ntBASIC2.57□□□□□ -2
TMEM88BA6NKF7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.57□□□□□ -2
TMEM88BA6NKF7 AL513534.2-201ENST00000603836 250 ntBASIC2.57□□□□□ -2
TMEM88BA6NKF7 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
TMEM88BA6NKF7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNU6-439P-201ENST00000384188 106 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNU6-747P-201ENST00000390928 104 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNU6-241P-201ENST00000391148 104 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNU6-177P-201ENST00000411257 104 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 RNA5SP182-201ENST00000516064 82 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 AC008133.2-201ENST00000624540 351 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 AC095038.3-201ENST00000634439 195 ntBASIC2.56□□□□□ -2
TMEM88BA6NKF7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM88BA6NKF7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM88BA6NKF7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TMEM88BA6NKF7 SNORD33-201ENST00000362761 85 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 RNY4P6-201ENST00000363667 96 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 MIR30A-201ENST00000385092 71 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 SNORA40.18-201ENST00000391200 128 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms