Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 AL034345.1-201ENST00000407768 123 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 RNU2-7P-201ENST00000410794 178 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 SNRPGP14-201ENST00000435400 219 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 HSPE1P9-201ENST00000440046 311 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.651-201ENST00000459380 103 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 CYCTP-201ENST00000504253 315 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 AC114811.1-201ENST00000507207 168 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-919P-201ENST00000516731 104 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 SNORA44.1-201ENST00000517031 108 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 MIR3198-2-201ENST00000577868 80 ntBASIC2.19□□□□□ -2.06
CTDP1Q9Y5B0 SNORA63D-201ENST00000364359 132 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1189P-201ENST00000383958 107 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 SNORA48.1-201ENST00000390879 135 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 AL035461.1-201ENST00000421490 332 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 RNA5SP236-201ENST00000516169 116 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 MIR5197-201ENST00000583721 112 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 AC015726.2-201ENST00000620112 122 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 U6.95-201ENST00000636931 70 ntBASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CTDP1Q9Y5B0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 SNORD58C-201ENST00000365223 64 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 SNORD38C-201ENST00000384381 69 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-476P-201ENST00000384726 107 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 MIR520A-201ENST00000384862 85 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 SNORA40.5-201ENST00000391061 128 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 SNORA25.15-201ENST00000516487 89 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 SCARNA15-202ENST00000516881 127 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 MTND5P34-201ENST00000568888 325 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 AC012493.3-201ENST00000604494 112 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 MIR376A2-201ENST00000636782 80 ntBASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CTDP1Q9Y5B0 MIRLET7C-201ENST00000362160 84 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 RNU1-17P-201ENST00000363022 152 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 SNORA4.2-201ENST00000365313 147 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 SNORA2.2-201ENST00000365473 135 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-44P-201ENST00000384045 107 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.617-201ENST00000410920 90 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 Y_RNA.630-201ENST00000411370 108 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 CALM2P4-201ENST00000430810 426 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 AC008834.1-201ENST00000511612 175 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 AC027279.3-201ENST00000625055 122 ntBASIC2.16□□□□□ -2.06
CTDP1Q9Y5B0 RNU6-1144P-201ENST00000384247 104 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 RPL31P63-201ENST00000422565 375 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 RN7SKP19-201ENST00000516016 252 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-781P-201ENST00000516377 101 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 AC084768.2-201ENST00000622736 221 ntBASIC2.15□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 MIR934-201ENST00000401241 83 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 RNU7-34P-201ENST00000459394 64 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 RNA5SP168-201ENST00000516642 112 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-113P-201ENST00000516653 101 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 SNORD36C-201ENST00000516733 66 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 RNU7-70P-201ENST00000516941 66 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 AC108081.1-201ENST00000604358 221 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 MIR6129-201ENST00000616087 109 ntBASIC2.14□□□□□ -2.07
CTDP1Q9Y5B0 AL391516.1-201ENST00000554380 2449 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-424P-201ENST00000384367 105 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 AC087499.4-201ENST00000448505 178 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 RNU7-12P-201ENST00000516030 62 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 SNORD33.1-201ENST00000516213 88 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 SNORA18.7-201ENST00000516910 131 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 AP003484.1-201ENST00000530974 250 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 AC025166.1-201ENST00000612411 163 ntBASIC2.13□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-833P-201ENST00000363486 107 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-112P-201ENST00000363599 104 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 Y_RNA.346-201ENST00000365385 112 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-429P-201ENST00000384582 108 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 AL670379.3-201ENST00000605040 251 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 AC103810.8-201ENST00000607347 118 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 AL121890.5-201ENST00000620848 304 ntBASIC2.12□□□□□ -2.07
CTDP1Q9Y5B0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 MIR548A3-201ENST00000385297 97 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 MIR1263-201ENST00000408324 86 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-938P-201ENST00000411285 103 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 AC015922.2-201ENST00000435593 184 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 RNA5SP481-201ENST00000516814 122 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 MIR4709-201ENST00000577272 72 ntBASIC2.11□□□□□ -2.07
CTDP1Q9Y5B0 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 330.3 ms