Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HMGN2P3-201ENST00000433603 273 ntBASIC3.09□□□□□ -1.91
USB1Q9BQ65 HMGN2P5-201ENST00000436882 273 ntBASIC3.09□□□□□ -1.91
USB1Q9BQ65 AC140658.3-201ENST00000567603 271 ntBASIC3.09□□□□□ -1.91
USB1Q9BQ65 AC020891.4-201ENST00000605745 93 ntBASIC3.09□□□□□ -1.91
USB1Q9BQ65 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.09□□□□□ -1.91
USB1Q9BQ65 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
USB1Q9BQ65 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.92
USB1Q9BQ65 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
USB1Q9BQ65 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
USB1Q9BQ65 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.08□□□□□ -1.92
USB1Q9BQ65 RNU1-148P-201ENST00000384472 162 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 Y_RNA.565-201ENST00000384719 101 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 MIR1283-2-201ENST00000408621 87 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 AC145423.2-201ENST00000610631 239 ntBASIC3.08□□□□□ -1.92
USB1Q9BQ65 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
USB1Q9BQ65 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
USB1Q9BQ65 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.07□□□□□ -1.92
USB1Q9BQ65 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USB1Q9BQ65 snoU13.27-201ENST00000459278 104 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 AC099513.1-201ENST00000490423 301 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 RNU7-43P-201ENST00000516554 64 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 RNA5SP137-201ENST00000516833 135 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 CYP3A52P-201ENST00000563326 91 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.07□□□□□ -1.92
USB1Q9BQ65 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.07□□□□□ -1.92
USB1Q9BQ65 AP001362.1-201ENST00000625165 124 ntBASIC3.07□□□□□ -1.92
USB1Q9BQ65 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.07□□□□□ -1.92
USB1Q9BQ65 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USB1Q9BQ65 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.06□□□□□ -1.92
USB1Q9BQ65 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USB1Q9BQ65 Y_RNA.168-201ENST00000363740 102 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 RNU6-1229P-201ENST00000364295 107 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 U8.9-201ENST00000365667 134 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 SUB1P4-201ENST00000566062 339 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 SNORD14A-201ENST00000606526 91 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 AC008133.2-201ENST00000624540 351 ntBASIC3.06□□□□□ -1.92
USB1Q9BQ65 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USB1Q9BQ65 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
USB1Q9BQ65 SNORA2B-201ENST00000384583 137 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 RNU6-1237P-201ENST00000384777 107 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 SNORA48.1-201ENST00000390879 135 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 RNA5SP465-201ENST00000391195 109 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 AL023284.1-201ENST00000403956 276 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 RNU6-519P-201ENST00000410590 108 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
USB1Q9BQ65 RNA5SP481-201ENST00000516814 122 ntBASIC3.05□□□□□ -1.92
USB1Q9BQ65 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
USB1Q9BQ65 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
USB1Q9BQ65 MIR30E-201ENST00000362104 92 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 MIR424-201ENST00000362227 98 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 RNU6-112P-201ENST00000363599 104 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 RNA5SP42-201ENST00000364278 115 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 RNU6-296P-201ENST00000384608 107 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 SNORA70.18-201ENST00000516696 98 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 MIR4764-201ENST00000580680 88 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 MIR3922-201ENST00000585192 84 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 AC007179.3-201ENST00000604976 235 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.04□□□□□ -1.92
USB1Q9BQ65 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
USB1Q9BQ65 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
USB1Q9BQ65 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.04□□□□□ -1.92
USB1Q9BQ65 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USB1Q9BQ65 AC093578.1-201ENST00000415219 368 ntBASIC3.03□□□□□ -1.92
USB1Q9BQ65 RNU7-26P-201ENST00000458980 63 ntBASIC3.03□□□□□ -1.92
USB1Q9BQ65 SCARNA4.1-201ENST00000628597 123 ntBASIC3.03□□□□□ -1.92
USB1Q9BQ65 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
USB1Q9BQ65 RNU6-315P-201ENST00000362666 107 ntBASIC3.02□□□□□ -1.93
USB1Q9BQ65 RNY1P13-201ENST00000365030 105 ntBASIC3.02□□□□□ -1.93
USB1Q9BQ65 MIR518A2-201ENST00000384966 87 ntBASIC3.02□□□□□ -1.93
USB1Q9BQ65 U7.4-201ENST00000614961 63 ntBASIC3.02□□□□□ -1.93
USB1Q9BQ65 MAPK10-266ENST00000641066 6555 ntBASIC3.02□□□□□ -1.93
USB1Q9BQ65 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.01□□□□□ -1.93
USB1Q9BQ65 MIR520C-201ENST00000385005 87 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 SNORD17-201ENST00000390930 237 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 MIR1236-201ENST00000408340 102 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 AC011753.1-201ENST00000451001 220 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 RNU7-153P-201ENST00000516455 62 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 SCARNA15.3-201ENST00000626315 122 ntBASIC3.01□□□□□ -1.93
USB1Q9BQ65 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USB1Q9BQ65 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USB1Q9BQ65 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3□□□□□ -1.93
USB1Q9BQ65 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
USB1Q9BQ65 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
USB1Q9BQ65 RNU4-35P-201ENST00000362588 141 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 SNORA70.4-201ENST00000365509 134 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 SNORD38B-201ENST00000384690 67 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 RNU6-129P-201ENST00000391022 107 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 SNORA11.1-201ENST00000408133 129 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 AC087499.7-201ENST00000441958 109 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 SNORA64.4-201ENST00000516632 81 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 AC026333.2-201ENST00000542164 106 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 AC133485.1-201ENST00000567176 124 ntBASIC3□□□□□ -1.93
USB1Q9BQ65 MIR548AO-201ENST00000579992 96 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms