Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR1263-201ENST00000408324 86 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.19□□□□□ -2.06
SYNE4Q8N205 FTH1P12-201ENST00000432137 551 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 SNRPGP13-201ENST00000442212 177 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 AL049830.1-201ENST00000468034 425 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 RNU7-193P-201ENST00000516723 65 ntBASIC2.19□□□□□ -2.06
SYNE4Q8N205 Y_RNA.327-201ENST00000365201 102 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 RNU6-1292P-201ENST00000383856 107 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 MIR548O-201ENST00000408583 114 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 AC090255.1-201ENST00000495779 349 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 RNU6-1116P-201ENST00000517269 99 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 MIR4255-201ENST00000579351 72 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 MIR502-201ENST00000606349 86 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 AL121890.5-201ENST00000620848 304 ntBASIC2.18□□□□□ -2.06
SYNE4Q8N205 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 CST2P1-201ENST00000425770 87 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 Y_RNA.649-201ENST00000459077 103 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 AL358944.1-201ENST00000528537 144 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 AP002004.2-201ENST00000531656 154 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 MIR4419B-201ENST00000577260 68 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 MIR5197-201ENST00000583721 112 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 AC005786.1-201ENST00000588553 154 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
SYNE4Q8N205 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.17□□□□□ -2.06
SYNE4Q8N205 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SYNE4Q8N205 MIR450A1-201ENST00000362262 91 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNU6-268P-201ENST00000364174 107 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNU6-42P-201ENST00000384165 107 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNU6-938P-201ENST00000411285 103 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNU6-126P-201ENST00000516685 103 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 SNORD36C-201ENST00000516733 66 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 RNA5SP480-201ENST00000516840 109 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SYNE4Q8N205 AL512598.1-201ENST00000610158 273 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 uc_338.28-201ENST00000612082 187 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 AC008555.8-201ENST00000623602 2168 ntBASIC2.16□□□□□ -2.06
SYNE4Q8N205 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
SYNE4Q8N205 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
SYNE4Q8N205 U8.5-201ENST00000364528 136 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 Y_RNA.547-201ENST00000384654 119 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 Y_RNA.549-201ENST00000384657 102 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 RNA5SP89-201ENST00000410300 108 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 RNU6-240P-201ENST00000516098 97 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 SNORA31.10-201ENST00000516482 106 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 MIR4762-201ENST00000585261 75 ntBASIC2.15□□□□□ -2.07
SYNE4Q8N205 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
SYNE4Q8N205 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SYNE4Q8N205 Y_RNA.528-201ENST00000384575 108 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 MT-TI-201ENST00000387365 69 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 AC004965.1-201ENST00000413033 213 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 HSPE1P9-201ENST00000440046 311 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 RNVU1-2-201ENST00000516326 135 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 AC024995.1-201ENST00000523014 93 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 AC006441.5-201ENST00000612680 209 ntBASIC2.14□□□□□ -2.07
SYNE4Q8N205 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SYNE4Q8N205 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SYNE4Q8N205 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SYNE4Q8N205 RNA5SP325-201ENST00000363756 130 ntBASIC2.13□□□□□ -2.07
SYNE4Q8N205 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.13□□□□□ -2.07
SYNE4Q8N205 SNORD45.4-201ENST00000516629 73 ntBASIC2.13□□□□□ -2.07
SYNE4Q8N205 MIR5094-201ENST00000578766 85 ntBASIC2.13□□□□□ -2.07
SYNE4Q8N205 MIR4452-201ENST00000583004 71 ntBASIC2.13□□□□□ -2.07
SYNE4Q8N205 AL035470.1-201ENST00000622571 220 ntBASIC2.13□□□□□ -2.07
SYNE4Q8N205 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SYNE4Q8N205 MIRLET7C-201ENST00000362160 84 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 Y_RNA.37-201ENST00000362606 108 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 Y_RNA.191-201ENST00000363972 113 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 Y_RNA.346-201ENST00000365385 112 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 RNU6-880P-201ENST00000384526 107 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 MIR515-2-201ENST00000384883 83 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 MIR515-1-201ENST00000384884 83 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SYNE4Q8N205 RNA5SP501-201ENST00000410990 112 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 MTATP6P21-201ENST00000440681 189 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 STAG3L5P-204ENST00000443759 179 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.12□□□□□ -2.07
SYNE4Q8N205 SNORA31.4-201ENST00000516049 129 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 AC087685.1-201ENST00000587507 141 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 HSPE1P19-201ENST00000603327 295 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 AL078603.1-201ENST00000603824 313 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 AL645939.4-201ENST00000604495 135 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 AL137067.1-201ENST00000615933 120 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 RMST_2.1-201ENST00000617263 136 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 MIR6734-201ENST00000621166 68 ntBASIC2.12□□□□□ -2.07
SYNE4Q8N205 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SYNE4Q8N205 RNU6-1084P-201ENST00000362498 107 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 SNORA4.2-201ENST00000365313 147 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 RNU6-106P-201ENST00000384405 107 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 SNORA48.1-201ENST00000390879 135 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 RNU6-554P-201ENST00000410466 106 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms