Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNU6-804P-201ENST00000384286 107 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 snoU13.25-201ENST00000458945 104 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 RPS26P48-201ENST00000491713 339 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 RNU2-13P-201ENST00000515909 113 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 SNORA18.4-201ENST00000516440 124 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
SHFQ7M4L6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SHFQ7M4L6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.31□□□□□ -2.2
SHFQ7M4L6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SHFQ7M4L6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORA25.7-201ENST00000364375 127 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 RNU6-1130P-201ENST00000365434 107 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 RNU6-209P-201ENST00000384118 107 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORA40.5-201ENST00000391061 128 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.3□□□□□ -2.2
SHFQ7M4L6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
SHFQ7M4L6 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 MIR3144-201ENST00000579460 79 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 SNORD115-40-201ENST00000606510 82 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 AC008133.2-201ENST00000624540 351 ntBASIC1.3□□□□□ -2.2
SHFQ7M4L6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
SHFQ7M4L6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 MIR624-201ENST00000385217 97 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 SNORA67.6-201ENST00000391093 99 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 RNA5SP127-201ENST00000411051 133 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
SHFQ7M4L6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
SHFQ7M4L6 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 MIR4791-201ENST00000607666 84 ntBASIC1.29□□□□□ -2.2
SHFQ7M4L6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
SHFQ7M4L6 Y_RNA.8-201ENST00000362353 102 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 RNU6-818P-201ENST00000364837 108 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 Y_RNA.464-201ENST00000384282 110 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 SNORA27-201ENST00000384323 126 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 Y_RNA.580-201ENST00000391004 95 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 SNORA75.5-201ENST00000391291 81 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 AC021753.1-201ENST00000635724 168 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 MIR6844-201ENST00000637122 62 ntBASIC1.28□□□□□ -2.2
SHFQ7M4L6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SHFQ7M4L6 RNY1P11-201ENST00000363759 113 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 Y_RNA.398-201ENST00000383952 99 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 SNORD116-18-201ENST00000383961 92 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 SNORA24-201ENST00000384096 131 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 RNU6-588P-201ENST00000410281 105 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 snoU13.15-201ENST00000459407 104 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 RPL23AP94-201ENST00000512518 302 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 RNU6-1212P-201ENST00000517023 104 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.27□□□□□ -2.21
SHFQ7M4L6 AC243994.1-201ENST00000618627 109 ntBASIC1.27□□□□□ -2.21
SHFQ7M4L6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.26□□□□□ -2.21
SHFQ7M4L6 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 RNU6-449P-201ENST00000383914 107 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 SNORA51.10-201ENST00000384418 136 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 SNORA67.5-201ENST00000391036 107 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 AC107297.1-201ENST00000459991 176 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 RPS29P24-201ENST00000486345 171 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 SCARNA15-202ENST00000516881 127 ntBASIC1.26□□□□□ -2.21
SHFQ7M4L6 MTND5P41-201ENST00000517498 206 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms