Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC015818.7-201ENST00000428754 109 ntBASIC0.44□□□□□ -2.34
RAB40BQ12829 AC087499.7-201ENST00000441958 109 ntBASIC0.44□□□□□ -2.34
RAB40BQ12829 MIR4662B-201ENST00000579498 81 ntBASIC0.44□□□□□ -2.34
RAB40BQ12829 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
RAB40BQ12829 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RAB40BQ12829 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RAB40BQ12829 Y_RNA.28-201ENST00000362554 111 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 SNORD115-28-201ENST00000363931 81 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 Y_RNA.394-201ENST00000383942 103 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 Y_RNA.494-201ENST00000384432 111 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 AC087499.4-201ENST00000448505 178 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 AC091959.1-201ENST00000495857 238 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 SNORD77.4-201ENST00000516158 81 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 RNU6-958P-201ENST00000516995 106 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
RAB40BQ12829 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RAB40BQ12829 RNU6-326P-201ENST00000365480 107 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 Y_RNA.380-201ENST00000365663 111 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 RNU6-662P-201ENST00000384253 104 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 RNU6-177P-201ENST00000411257 104 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.42□□□□□ -2.34
RAB40BQ12829 RNU6-988P-201ENST00000519081 107 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 AC007751.1-201ENST00000529260 376 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 AP000942.4-201ENST00000604811 241 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 MIR6515-201ENST00000619843 57 ntBASIC0.42□□□□□ -2.34
RAB40BQ12829 Y_RNA.486-201ENST00000384398 107 ntBASIC0.41□□□□□ -2.34
RAB40BQ12829 Y_RNA.541-201ENST00000384640 113 ntBASIC0.41□□□□□ -2.34
RAB40BQ12829 Y_RNA.631-201ENST00000459607 101 ntBASIC0.41□□□□□ -2.34
RAB40BQ12829 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.41□□□□□ -2.34
RAB40BQ12829 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.41□□□□□ -2.34
RAB40BQ12829 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.41□□□□□ -2.34
RAB40BQ12829 snoU2_19.2-201ENST00000363024 80 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORA63C-201ENST00000364578 129 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 Y_RNA.509-201ENST00000384506 99 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORD38B-201ENST00000384690 67 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORA40.5-201ENST00000391061 128 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 Y_RNA.587-201ENST00000391210 103 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 MTATP6P23-201ENST00000440153 476 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 MTCO2P24-201ENST00000515611 426 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 RNU6-693P-201ENST00000516134 107 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 RNY3P15-201ENST00000516297 97 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORA18.4-201ENST00000516440 124 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 RNU7-53P-201ENST00000516705 60 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
RAB40BQ12829 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.4□□□□□ -2.35
RAB40BQ12829 MIR4804-201ENST00000581683 73 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AC006006.1-201ENST00000603082 144 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AL160413.1-201ENST00000622780 310 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 SNORD38B-202ENST00000625943 69 ntBASIC0.4□□□□□ -2.35
RAB40BQ12829 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.39□□□□□ -2.35
RAB40BQ12829 Y_RNA.37-201ENST00000362606 108 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 RNU6-770P-201ENST00000363929 105 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 RNY1-201ENST00000364228 113 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 RNU6-474P-201ENST00000384243 107 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 MIR215-201ENST00000384858 110 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 MIR518F-201ENST00000384973 87 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 MIR526A2-201ENST00000390198 65 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
RAB40BQ12829 RNU7-73P-201ENST00000458743 63 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 AC131281.1-201ENST00000522984 164 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 MIR3612-201ENST00000579753 87 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 AC020891.4-201ENST00000605745 93 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 AL008718.3-201ENST00000610217 321 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 Y_RNA.802-201ENST00000614892 130 ntBASIC0.39□□□□□ -2.35
RAB40BQ12829 Y_RNA.19-201ENST00000362462 99 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 Y_RNA.217-201ENST00000364214 105 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU4-10P-201ENST00000364383 140 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 SNORD24-201ENST00000383884 75 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 SNORA27-201ENST00000384323 126 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 MIR598-201ENST00000384868 97 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU6-913P-201ENST00000390913 95 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU6-938P-201ENST00000411285 103 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RPL21P38-201ENST00000418090 167 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 ELOCP20-201ENST00000422460 345 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 Y_RNA.641-201ENST00000459414 105 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RPS29P24-201ENST00000486345 171 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 SNORA27.4-201ENST00000516650 95 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU6-126P-201ENST00000516685 103 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 RNU6-1270P-201ENST00000517128 108 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 snoU18.1-201ENST00000629629 71 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 AC010332.2-201ENST00000613083 1904 ntBASIC0.38□□□□□ -2.35
RAB40BQ12829 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
RAB40BQ12829 MTND4P29-201ENST00000503122 1372 ntBASIC0.37□□□□□ -2.35
RAB40BQ12829 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
RAB40BQ12829 Y_RNA.118-201ENST00000363300 101 ntBASIC0.37□□□□□ -2.35
RAB40BQ12829 Y_RNA.210-201ENST00000364161 110 ntBASIC0.37□□□□□ -2.35
RAB40BQ12829 Y_RNA.214-201ENST00000364201 112 ntBASIC0.37□□□□□ -2.35
RAB40BQ12829 Y_RNA.276-201ENST00000364732 109 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 8734.5 ms