Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-1048P-201ENST00000364054 107 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 RNU6-654P-201ENST00000364373 107 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 SNORA22B-201ENST00000383876 138 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 Y_RNA.476-201ENST00000384347 108 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 Y_RNA.527-201ENST00000384573 102 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 MIR1302-11-201ENST00000408051 138 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 MIR1302-9-201ENST00000408365 138 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 MIR1302-10-201ENST00000408734 138 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 RNU6-121P-201ENST00000410525 99 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 snoU13.2-201ENST00000459201 104 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 TRBVB-201ENST00000477100 408 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 AC023827.1-201ENST00000569247 97 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 MIR1302-2-201ENST00000607096 138 ntBASIC0.4□□□□□ -2.35
SCN4AP35499 Y_RNA.26-201ENST00000362539 101 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SCN4AP35499 Y_RNA.526-201ENST00000384572 110 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 MIR548A2-201ENST00000384956 97 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 ELOCP20-201ENST00000422460 345 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN4AP35499 SNORA27.4-201ENST00000516650 95 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 RNU6-365P-201ENST00000517113 106 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 SNORD116.3-201ENST00000517176 78 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN4AP35499 MIR548S-201ENST00000581352 82 ntBASIC0.39□□□□□ -2.35
SCN4AP35499 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.39□□□□□ -2.35
SCN4AP35499 UBE2WP1-201ENST00000362030 340 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 Y_RNA.66-201ENST00000362862 102 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 Y_RNA.168-201ENST00000363740 102 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 RNU6-770P-201ENST00000363929 105 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 RNU6-1335P-201ENST00000365426 107 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 Y_RNA.602-201ENST00000410535 92 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 MIR4636-201ENST00000582271 80 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AL353765.1-201ENST00000605514 183 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 MIR6516-201ENST00000630554 81 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 MTND1P7-201ENST00000632801 297 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 SNORD14E-201ENST00000364009 85 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 RNU6-484P-201ENST00000384016 107 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 Y_RNA.431-201ENST00000384086 102 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 RNU6-308P-201ENST00000390957 107 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AC022028.1-201ENST00000412054 408 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AL157398.1-201ENST00000452981 186 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 SERF1AP1-201ENST00000514575 187 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 C8orf59P2-201ENST00000603441 271 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AL355297.3-201ENST00000604082 446 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 AC104465.1-201ENST00000611365 139 ntBASIC0.38□□□□□ -2.35
SCN4AP35499 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SCN4AP35499 Y_RNA.581-201ENST00000391017 97 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 MIR1265-201ENST00000408444 86 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 RPS26P5-201ENST00000418544 335 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 RNU7-67P-201ENST00000459003 62 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 RNU6-475P-201ENST00000516073 104 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 SNORA18.4-201ENST00000516440 124 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 RNU6-197P-201ENST00000516680 100 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 RNU6-897P-201ENST00000517135 105 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 AC131055.1-201ENST00000584626 316 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 AC124312.5-201ENST00000604451 268 ntBASIC0.37□□□□□ -2.35
SCN4AP35499 U8.5-201ENST00000364528 136 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 Y_RNA.395-201ENST00000383945 109 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 SNORA27-201ENST00000384323 126 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 SNORD72-201ENST00000390994 80 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 RPS3AP1-201ENST00000413190 320 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MIR18B-201ENST00000454574 71 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 RNU6-369P-201ENST00000362515 102 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 RNU6-474P-201ENST00000384243 107 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 SNORA8.3-201ENST00000384679 139 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MIR518F-201ENST00000384973 87 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 RNU6-763P-201ENST00000390865 106 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 RNU6-994P-201ENST00000410507 111 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 AC090844.1-201ENST00000422019 156 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 NDUFA4P2-201ENST00000489989 244 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MTCO2P24-201ENST00000515611 426 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 AP003733.2-201ENST00000529409 171 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MIR548AO-201ENST00000579992 96 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 MIR3171-201ENST00000584270 74 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 AP000942.4-201ENST00000604811 241 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 AL160413.1-201ENST00000622780 310 ntBASIC0.36□□□□□ -2.35
SCN4AP35499 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.35□□□□□ -2.35
SCN4AP35499 SNORA2A-201ENST00000383885 135 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 RNY3P5-201ENST00000384127 102 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 MIR125B2-201ENST00000385128 89 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 RNA5SP496-201ENST00000391240 109 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 AL035398.1-201ENST00000430869 322 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 AL731563.1-201ENST00000442202 214 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 AC087499.4-201ENST00000448505 178 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 Y_RNA.637-201ENST00000459424 114 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.35□□□□□ -2.35
SCN4AP35499 RNU4-54P-201ENST00000516428 129 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 AL442663.2-201ENST00000554385 511 ntBASIC0.35□□□□□ -2.35
SCN4AP35499 snoU2_19.2-201ENST00000363024 80 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 RNU4-80P-201ENST00000363200 141 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 RNU6-728P-201ENST00000365375 104 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 Y_RNA.351-201ENST00000365436 96 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 AL590004.1-201ENST00000405321 300 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 SNRPGP8-201ENST00000454064 226 ntBASIC0.34□□□□□ -2.35
SCN4AP35499 Y_RNA.666-201ENST00000516187 112 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms