Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SNORD115-40-201ENST00000606510 82 ntBASIC1.09□□□□□ -2.23
UBL4AP11441 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
UBL4AP11441 AC134878.1-201ENST00000619901 243 ntBASIC1.09□□□□□ -2.23
UBL4AP11441 U4.1-201ENST00000620349 87 ntBASIC1.09□□□□□ -2.23
UBL4AP11441 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
UBL4AP11441 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
UBL4AP11441 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 Y_RNA.199-201ENST00000364014 102 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 Y_RNA.634-201ENST00000364811 113 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 SNORA40.5-201ENST00000391061 128 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 RNU6-381P-201ENST00000391259 108 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 MIR1302-7-201ENST00000408841 72 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 Y_RNA.622-201ENST00000411091 108 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 MTND3P2-201ENST00000438452 342 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 Y_RNA.668-201ENST00000516233 93 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.08□□□□□ -2.24
UBL4AP11441 AC099654.10-201ENST00000640395 161 ntBASIC1.08□□□□□ -2.24
UBL4AP11441 Y_RNA.37-201ENST00000362606 108 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 RNU6-396P-201ENST00000365369 105 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 RNU4-17P-201ENST00000365598 141 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 RNU6-484P-201ENST00000384016 107 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 Y_RNA.478-201ENST00000384358 107 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 MIR518F-201ENST00000384973 87 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 RNU7-67P-201ENST00000459003 62 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 AP003484.1-201ENST00000530974 250 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 AC011921.3-201ENST00000605540 361 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 AC062037.2-201ENST00000610137 73 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
UBL4AP11441 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
UBL4AP11441 RNU6-103P-201ENST00000363686 107 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 Y_RNA.350-201ENST00000365409 98 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 MIR548A2-201ENST00000384956 97 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 snoU13.16-201ENST00000459350 104 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 MIR548AO-201ENST00000579992 96 ntBASIC1.06□□□□□ -2.24
UBL4AP11441 Y_RNA.20-201ENST00000362479 113 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 Y_RNA.66-201ENST00000362862 102 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 SNORD27-201ENST00000363981 72 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 RNU6-728P-201ENST00000365375 104 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 SNORA24-201ENST00000384096 131 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 Y_RNA.494-201ENST00000384432 111 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 MIR942-201ENST00000401111 86 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 MIR2115-201ENST00000516657 100 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 AC023827.1-201ENST00000569247 97 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 AC131055.1-201ENST00000584626 316 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 MIR6516-201ENST00000630554 81 ntBASIC1.05□□□□□ -2.24
UBL4AP11441 Y_RNA.65-201ENST00000362846 100 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 Y_RNA.91-201ENST00000363042 107 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 SNORD45.3-201ENST00000363836 72 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 RNY4P28-201ENST00000365281 93 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 Y_RNA.410-201ENST00000383992 113 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 RNU6-196P-201ENST00000384315 107 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 SNORD58.1-201ENST00000391313 66 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 SNORA79-201ENST00000408376 140 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 RNU6-938P-201ENST00000411285 103 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 AC097639.2-201ENST00000603159 172 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 AP000942.4-201ENST00000604811 241 ntBASIC1.04□□□□□ -2.24
UBL4AP11441 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
UBL4AP11441 SNORA27-201ENST00000384323 126 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.03□□□□□ -2.24
UBL4AP11441 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 Y_RNA.673-201ENST00000516306 88 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 RNU6-197P-201ENST00000516680 100 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 MIR4503-201ENST00000582187 83 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 snoU13.31-201ENST00000607291 104 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
UBL4AP11441 Y_RNA.269-201ENST00000364685 89 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 RNU6-702P-201ENST00000364982 107 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 Y_RNA.477-201ENST00000384352 108 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 AF228730.3-201ENST00000436691 102 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 RNU6-237P-201ENST00000515985 71 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 MIR4744-201ENST00000581563 82 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
UBL4AP11441 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBL4AP11441 Y_RNA.193-201ENST00000363979 102 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 Y_RNA.539-201ENST00000384635 107 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
UBL4AP11441 PDCD5P2-201ENST00000507570 312 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 MTND1P19-201ENST00000511780 315 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 RNU7-53P-201ENST00000516705 60 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 SNORD36C-201ENST00000516733 66 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 MIR3128-201ENST00000581957 66 ntBASIC1.01□□□□□ -2.25
UBL4AP11441 Y_RNA.308-201ENST00000365043 101 ntBASIC1□□□□□ -2.25
UBL4AP11441 Y_RNA.327-201ENST00000365201 102 ntBASIC1□□□□□ -2.25
UBL4AP11441 RNU6-1189P-201ENST00000383958 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms