Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU6-349P-201ENST00000362402 107 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 RNU6-268P-201ENST00000364174 107 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 RNU6-1107P-201ENST00000364817 104 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SNHG28P0DPA3 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 MIR5197-201ENST00000583721 112 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
SNHG28P0DPA3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SNHG28P0DPA3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 MIR561-201ENST00000385216 97 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 HMGN2P32-201ENST00000444648 269 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 CYP2C59P-201ENST00000457790 269 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 RNA5SP458-201ENST00000516188 119 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 RNU6-830P-201ENST00000516353 107 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 MIR4762-201ENST00000585261 75 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 AL137067.1-201ENST00000615933 120 ntBASIC1.82□□□□□ -2.12
SNHG28P0DPA3 RNU6-60P-201ENST00000364792 103 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 SNORD12C-201ENST00000386307 89 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 MIR548O-201ENST00000408583 114 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 SNORA19.1-201ENST00000410656 129 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.81□□□□□ -2.12
SNHG28P0DPA3 RPS26P48-201ENST00000491713 339 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 RNU1-142P-201ENST00000516682 145 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 RNU6-537P-201ENST00000517277 103 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 AC006441.5-201ENST00000612680 209 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.81□□□□□ -2.12
SNHG28P0DPA3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNHG28P0DPA3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 SNORD68-201ENST00000363214 84 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 RNU6-49P-201ENST00000384256 107 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 MIR570-201ENST00000384917 97 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 MIR1323-201ENST00000408090 73 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 RNY4P30-201ENST00000410216 95 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 RNU2-63P-201ENST00000410792 194 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 SRIP3-201ENST00000413200 219 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 AL031737.1-201ENST00000450125 223 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 RNU1-131P-201ENST00000458943 161 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 SNORA31.10-201ENST00000516482 106 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.8□□□□□ -2.12
SNHG28P0DPA3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SNHG28P0DPA3 AL358944.1-201ENST00000528537 144 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 AC084364.2-201ENST00000546924 395 ntBASIC1.8□□□□□ -2.12
SNHG28P0DPA3 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 SNORA63.5-201ENST00000363548 123 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 MIR488-201ENST00000365739 83 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-32P-201ENST00000383948 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-13P-201ENST00000384248 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-12P-201ENST00000384604 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-41P-201ENST00000384741 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 MTATP6P21-201ENST00000440681 189 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 AC009238.1-201ENST00000442165 424 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 AC009237.6-201ENST00000446969 424 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-109P-201ENST00000516364 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU6-184P-201ENST00000516514 107 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNY4P20-201ENST00000516678 93 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 RNU7-193P-201ENST00000516723 65 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 AP001318.4-201ENST00000616637 121 ntBASIC1.79□□□□□ -2.12
SNHG28P0DPA3 U8.5-201ENST00000364528 136 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 SNORA2.2-201ENST00000365473 135 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.369-201ENST00000365568 117 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 MIR517C-201ENST00000385103 95 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 RNA5SP270-201ENST00000411361 118 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 RPS29P24-201ENST00000486345 171 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 COX6CP6-201ENST00000490840 228 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.78□□□□□ -2.12
SNHG28P0DPA3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 RNU2-35P-201ENST00000516446 142 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 SNORD45.4-201ENST00000516629 73 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 RNU6-126P-201ENST00000516685 103 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 AP002004.2-201ENST00000531656 154 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 AL627230.6-201ENST00000611129 280 ntBASIC1.78□□□□□ -2.12
SNHG28P0DPA3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 RNU1-42P-201ENST00000364033 160 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 RNA5SP136-201ENST00000410906 107 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 AP1B1P2-201ENST00000416196 106 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 BTF3P4-201ENST00000418852 495 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 CST2P1-201ENST00000425770 87 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms