Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORD45.4-201ENST00000516629 73 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 AC022254.1-201ENST00000567857 235 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 MIR548Z-201ENST00000584743 97 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 Y_RNA.773-201ENST00000607168 90 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 AC012531.4-201ENST00000616509 177 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 snoU2-30.1-201ENST00000365012 70 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 RNA5SP109-201ENST00000391010 116 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 Y_RNA.601-201ENST00000410500 113 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 AC108210.2-201ENST00000503681 201 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 RNU6-162P-201ENST00000516228 103 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 AC015712.3-201ENST00000559380 164 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 DEFB122-202ENST00000569013 197 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 MIR1273D-201ENST00000577266 86 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 MIR3618-201ENST00000580330 88 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 AL513534.2-201ENST00000603836 250 ntBASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.26□□□□□ -1.89
CSB-PGBD3P0DP91 Y_RNA.73-201ENST00000362910 113 ntBASIC3.25□□□□□ -1.89
CSB-PGBD3P0DP91 MIR1255A-201ENST00000408338 113 ntBASIC3.25□□□□□ -1.89
CSB-PGBD3P0DP91 SNX2P2-201ENST00000424553 323 ntBASIC3.25□□□□□ -1.89
CSB-PGBD3P0DP91 AC095038.3-201ENST00000634439 195 ntBASIC3.25□□□□□ -1.89
CSB-PGBD3P0DP91 MIR342-201ENST00000362212 99 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 MIR577-201ENST00000385196 96 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 AL512326.2-201ENST00000426359 151 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 RNU7-80P-201ENST00000459562 61 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 RNU2-13P-201ENST00000515909 113 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 U7.3-201ENST00000616123 62 ntBASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CSB-PGBD3P0DP91 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 VTRNA1-1-201ENST00000363120 99 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 RNU1-52P-201ENST00000384190 164 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 SNORA80E-201ENST00000384744 137 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 AC069257.2-201ENST00000441819 155 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 AC078899.2-201ENST00000595282 212 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.23□□□□□ -1.89
CSB-PGBD3P0DP91 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RNU6-170P-201ENST00000362832 104 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 Y_RNA.360-201ENST00000365512 102 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RN7SKP200-201ENST00000410564 320 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RNA5SP144-201ENST00000410846 116 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 AC004941.2-201ENST00000427009 228 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 AL353813.1-201ENST00000440700 253 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 AC087499.4-201ENST00000448505 178 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RPS23P4-201ENST00000487908 423 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 AC026436.1-201ENST00000510537 270 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RNVU1-2-201ENST00000516326 135 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 AC103810.6-201ENST00000606708 136 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 MIR6873-201ENST00000622788 63 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 MIR6733-201ENST00000635723 61 ntBASIC3.22□□□□□ -1.89
CSB-PGBD3P0DP91 RNU6-832P-201ENST00000363319 107 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 RNA5SP456-201ENST00000364002 114 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 SNORA3A-201ENST00000364113 130 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 RNY1P1-201ENST00000364372 112 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.336-201ENST00000365307 109 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-497P-201ENST00000365316 104 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.507-201ENST00000384500 99 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 MIR605-201ENST00000385078 83 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 RPL39P39-201ENST00000455840 151 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 AC004812.1-201ENST00000540773 146 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 MIR4694-201ENST00000578534 80 ntBASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CSB-PGBD3P0DP91 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-661P-201ENST00000362409 107 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-363P-201ENST00000362895 105 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SNORD115-19-201ENST00000363098 82 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SNORD115-18-201ENST00000363293 82 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.155-201ENST00000363632 101 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SNORD115-17-201ENST00000364612 82 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SNORA4.2-201ENST00000365313 147 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.454-201ENST00000384224 113 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 Y_RNA.494-201ENST00000384432 111 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-813P-201ENST00000384691 107 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SNORA48.1-201ENST00000390879 135 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 MIR4778-201ENST00000577635 80 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 IGLL4P-201ENST00000614590 133 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 MIR8054-201ENST00000620877 86 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 MIR203B-201ENST00000636080 86 ntBASIC3.2□□□□□ -1.9
CSB-PGBD3P0DP91 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 SNORD114-1-201ENST00000362705 72 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNA5SP99-201ENST00000364020 114 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-787P-201ENST00000384032 107 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNA5SP482-201ENST00000391269 118 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 AL627390.1-201ENST00000396055 340 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-733P-201ENST00000410759 104 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 AC096949.1-201ENST00000412047 152 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 BTF3P4-201ENST00000418852 495 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNU7-28P-201ENST00000516759 62 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 RNU6-1116P-201ENST00000517269 99 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 MIR1291-201ENST00000627649 87 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 MIR3202-2-201ENST00000635980 79 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 AC091304.10-201ENST00000641554 121 ntBASIC3.19□□□□□ -1.9
CSB-PGBD3P0DP91 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms