Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TOP3BO95985 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
TOP3BO95985 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 SNORD58C-201ENST00000365223 64 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 RNY4P18-201ENST00000391107 89 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 AL627390.1-201ENST00000396055 340 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 Y_RNA.617-201ENST00000410920 90 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
TOP3BO95985 SNRPGP13-201ENST00000442212 177 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 RNU6-693P-201ENST00000516134 107 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 SNORD33.1-201ENST00000516213 88 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 Y_RNA.714-201ENST00000517065 90 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 AC022217.4-201ENST00000604389 163 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 AL022345.2-201ENST00000606307 135 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
TOP3BO95985 AL391516.1-201ENST00000554380 2449 ntBASIC1.91□□□□□ -2.1
TOP3BO95985 SNORD68-201ENST00000363214 84 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 RNA5SP325-201ENST00000363756 130 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 Y_RNA.242-201ENST00000364473 110 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 MIR1276-201ENST00000408707 83 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 AF228730.3-201ENST00000436691 102 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 MTATP6P21-201ENST00000440681 189 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 RNA5SP236-201ENST00000516169 116 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 AC108081.1-201ENST00000604358 221 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
TOP3BO95985 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
TOP3BO95985 MTND5P32-201ENST00000560711 1802 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 SNORA63.4-201ENST00000362763 126 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 U8.5-201ENST00000364528 136 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 MIR518F-201ENST00000384973 87 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 AL606517.2-201ENST00000442855 241 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 RNU6-781P-201ENST00000516377 101 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 Y_RNA.709-201ENST00000516952 92 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 MIR4762-201ENST00000585261 75 ntBASIC1.89□□□□□ -2.11
TOP3BO95985 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
TOP3BO95985 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
TOP3BO95985 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TOP3BO95985 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TOP3BO95985 MIR802-201ENST00000390235 94 ntBASIC1.88□□□□□ -2.11
TOP3BO95985 AC245047.3-201ENST00000429428 127 ntBASIC1.88□□□□□ -2.11
TOP3BO95985 PDCD5P2-201ENST00000507570 312 ntBASIC1.88□□□□□ -2.11
TOP3BO95985 RNU6-589P-201ENST00000516485 107 ntBASIC1.88□□□□□ -2.11
TOP3BO95985 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
TOP3BO95985 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
TOP3BO95985 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TOP3BO95985 SNORD114-26-201ENST00000363543 72 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 MIRLET7F2-201ENST00000385277 83 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 MIR548O-201ENST00000408583 114 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 AC069257.2-201ENST00000441819 155 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 RN7SKP19-201ENST00000516016 252 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 RNU6-1149P-201ENST00000516810 97 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 SCARNA15-202ENST00000516881 127 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP3BO95985 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 AL670379.3-201ENST00000605040 251 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 MIR376A2-201ENST00000636782 80 ntBASIC1.87□□□□□ -2.11
TOP3BO95985 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TOP3BO95985 RNU6-1084P-201ENST00000362498 107 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RNA5SP276-201ENST00000362580 94 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 SNORD14E-201ENST00000364009 85 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 snoU2-30.1-201ENST00000365012 70 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RNU6-442P-201ENST00000383968 104 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RNA5SP109-201ENST00000391010 116 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RNA5SP482-201ENST00000391269 118 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 SNRPGP14-201ENST00000435400 219 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 IGKV1-22-201ENST00000524313 326 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TOP3BO95985 DNAJC19P9-201ENST00000555084 351 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 MIR5197-201ENST00000583721 112 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 AC006441.5-201ENST00000612680 209 ntBASIC1.86□□□□□ -2.11
TOP3BO95985 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TOP3BO95985 Y_RNA.265-201ENST00000364677 108 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 MIR548A3-201ENST00000385297 97 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 RNU7-25P-201ENST00000516544 62 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
TOP3BO95985 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
TOP3BO95985 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 AC025166.1-201ENST00000612411 163 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 AL121890.5-201ENST00000620848 304 ntBASIC1.85□□□□□ -2.11
TOP3BO95985 RNU6-268P-201ENST00000364174 107 ntBASIC1.84□□□□□ -2.11
TOP3BO95985 RNU6-755P-201ENST00000364400 103 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms