Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR4762-201ENST00000585261 75 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 U1.36-201ENST00000620684 176 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
SMAD6O43541 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
SMAD6O43541 RNU6-1084P-201ENST00000362498 107 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 Y_RNA.35-201ENST00000362601 101 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORD14E-201ENST00000364009 85 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORA22-201ENST00000383907 134 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR548A3-201ENST00000385297 97 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR548O-201ENST00000408583 114 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.74□□□□□ -2.13
SMAD6O43541 BX510359.4-201ENST00000423750 193 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 RNU7-25P-201ENST00000516544 62 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AC025166.1-201ENST00000612411 163 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 AL121890.5-201ENST00000620848 304 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 ICE2P2-201ENST00000483823 2787 ntBASIC1.74□□□□□ -2.13
SMAD6O43541 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SMAD6O43541 RNU1-58P-201ENST00000362413 163 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-268P-201ENST00000364174 107 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 snoU2-30.1-201ENST00000365012 70 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNORD116-21-201ENST00000384507 92 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR1263-201ENST00000408324 86 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.73□□□□□ -2.13
SMAD6O43541 AC063976.4-201ENST00000421971 163 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNRPGP14-201ENST00000435400 219 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 CYCTP-201ENST00000504253 315 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-237P-201ENST00000515985 71 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 SNORD45.4-201ENST00000516629 73 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MIR5197-201ENST00000583721 112 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 AC006441.5-201ENST00000612680 209 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 MTND5P18-201ENST00000445624 1801 ntBASIC1.73□□□□□ -2.13
SMAD6O43541 RNU6-755P-201ENST00000364400 103 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 SNORA17.3-201ENST00000391159 129 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 RNA5SP482-201ENST00000391269 118 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.72□□□□□ -2.13
SMAD6O43541 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 Y_RNA.649-201ENST00000459077 103 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.72□□□□□ -2.13
SMAD6O43541 AC084364.2-201ENST00000546924 395 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 AC005786.1-201ENST00000588553 154 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
SMAD6O43541 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.72□□□□□ -2.13
SMAD6O43541 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMAD6O43541 MIR597-201ENST00000384968 97 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 MIR548A1-201ENST00000385041 97 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-482P-201ENST00000391068 107 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 CALM2P4-201ENST00000430810 426 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 RNU6-1116P-201ENST00000517269 99 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
SMAD6O43541 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.71□□□□□ -2.14
SMAD6O43541 MIR5094-201ENST00000578766 85 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 AC134878.1-201ENST00000619901 243 ntBASIC1.71□□□□□ -2.14
SMAD6O43541 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMAD6O43541 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
SMAD6O43541 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.7□□□□□ -2.14
SMAD6O43541 Y_RNA.37-201ENST00000362606 108 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORA2.2-201ENST00000365473 135 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 Y_RNA.366-201ENST00000365540 102 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-1189P-201ENST00000383958 107 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-938P-201ENST00000411285 103 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORA31.10-201ENST00000516482 106 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU6-113P-201ENST00000516653 101 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 SNORD36C-201ENST00000516733 66 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR3613-201ENST00000579844 87 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.7□□□□□ -2.14
SMAD6O43541 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SMAD6O43541 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMAD6O43541 SNORD115-28-201ENST00000363931 81 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-1019P-201ENST00000364424 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.336-201ENST00000365307 109 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-147P-201ENST00000383983 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.410-201ENST00000383992 113 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 RNU6-880P-201ENST00000384526 107 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 Y_RNA.528-201ENST00000384575 108 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms