Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR5688-201ENST00000580619 83 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC006504.6-201ENST00000590142 199 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC008737.2-201ENST00000599446 118 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL049861.1-201ENST00000603130 150 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.44-201ENST00000362676 108 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-238P-201ENST00000363313 106 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 snoU2_19.4-201ENST00000364329 80 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORA80D-201ENST00000384488 135 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.547-201ENST00000384654 119 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-1011P-201ENST00000384668 107 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR570-201ENST00000384917 97 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RPL39P39-201ENST00000455840 151 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU7-25P-201ENST00000516544 62 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU7-181P-201ENST00000517234 74 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC012433.1-201ENST00000588916 398 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 AL360085.1-201ENST00000604713 532 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 U2.14-201ENST00000615943 113 ntBASIC0.71□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORA63-201ENST00000363450 132 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR15B-201ENST00000385045 98 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 MTND1P19-201ENST00000511780 315 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 AL442663.2-201ENST00000554385 511 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR4724-201ENST00000579485 89 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC008133.2-201ENST00000624540 351 ntBASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.76-201ENST00000362931 109 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-653P-201ENST00000363074 106 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.293-201ENST00000364908 93 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-484P-201ENST00000384016 107 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-514P-201ENST00000384208 107 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.461-201ENST00000384263 103 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORD38C-201ENST00000384381 69 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR518F-201ENST00000384973 87 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 MT-TT-201ENST00000387460 66 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-453P-201ENST00000516819 85 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC037487.3-201ENST00000606668 112 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.66-201ENST00000362862 102 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORA24-201ENST00000384096 131 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNRPGP8-201ENST00000454064 226 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORD127-201ENST00000458892 86 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC036111.3-201ENST00000526389 112 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR548AO-201ENST00000579992 96 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR4791-201ENST00000607666 84 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 SEPT14P17-201ENST00000617978 177 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR6516-201ENST00000630554 81 ntBASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR367-201ENST00000362299 68 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-654P-201ENST00000364373 107 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.304-201ENST00000365011 112 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORD61-201ENST00000384252 73 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORD58.1-201ENST00000391313 66 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR1302-6-201ENST00000408466 90 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 MTND2P23-201ENST00000422990 651 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.668-201ENST00000516233 93 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC131055.1-201ENST00000584626 316 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC015726.2-201ENST00000620112 122 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 AL365265.1-201ENST00000621045 234 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 MTND1P7-201ENST00000632801 297 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC099654.10-201ENST00000640395 161 ntBASIC0.67□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 Y_RNA.459-201ENST00000384251 102 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 SNORA8.3-201ENST00000384679 139 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-381P-201ENST00000391259 108 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 MIR548O-201ENST00000408583 114 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU2-38P-201ENST00000410856 79 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC090844.1-201ENST00000422019 156 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 MTCYBP9-201ENST00000431021 303 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU7-90P-201ENST00000459216 62 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 RNU6-561P-201ENST00000516222 102 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 AC097639.2-201ENST00000603159 172 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.66□□□□□ -2.3
TMX2-CTNND1H3BSU7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms