Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SNORA8.3-201ENST00000384679 139 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.587-201ENST00000391210 103 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR1302-6-201ENST00000408466 90 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR548O-201ENST00000408583 114 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 AL358176.2-201ENST00000425769 204 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU11-2P-201ENST00000516898 142 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR4643-201ENST00000577473 78 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR4791-201ENST00000607666 84 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.396-201ENST00000383949 103 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 AC006006.1-201ENST00000603082 144 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR6516-201ENST00000630554 81 ntBASIC0.84□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.47-201ENST00000362697 108 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.176-201ENST00000363815 109 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 snoU2_19.4-201ENST00000364329 80 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.330-201ENST00000365230 109 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR548A2-201ENST00000384956 97 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR4662B-201ENST00000579498 81 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR548AO-201ENST00000579992 96 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 MTND1P7-201ENST00000632801 297 ntBASIC0.83□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-654P-201ENST00000364373 107 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORA1.2-201ENST00000365189 134 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-1067P-201ENST00000384752 107 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR7-2-201ENST00000384970 110 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR518F-201ENST00000384973 87 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-847P-201ENST00000411115 108 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-938P-201ENST00000411285 103 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 SCARNA8-201ENST00000515924 131 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 AC109810.1-201ENST00000534066 224 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 AC012433.1-201ENST00000588916 398 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 AL360085.1-201ENST00000604713 532 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 AC011921.3-201ENST00000605540 361 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.82□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.36-201ENST00000362602 112 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORA24-201ENST00000384096 131 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.459-201ENST00000384251 102 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD61-201ENST00000384252 73 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORA51.10-201ENST00000384418 136 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-342P-201ENST00000384521 104 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR568-201ENST00000385036 95 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 MT-TT-201ENST00000387460 66 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 SNRPGP8-201ENST00000454064 226 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 AC023827.1-201ENST00000569247 97 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 AL365265.1-201ENST00000621045 234 ntBASIC0.81□□□□□ -2.28
NEDD8-MDP1E9PL57 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.66-201ENST00000362862 102 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-653P-201ENST00000363074 106 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.133-201ENST00000363428 110 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-28-201ENST00000363931 81 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.304-201ENST00000365011 112 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-484P-201ENST00000384016 107 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-453P-201ENST00000516819 85 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 AC243994.1-201ENST00000618627 109 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 U6.104-201ENST00000637979 90 ntBASIC0.8□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.37-201ENST00000362606 108 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-888P-201ENST00000363010 101 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD114-26-201ENST00000363543 72 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.352-201ENST00000365439 102 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD24-201ENST00000383884 75 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.416-201ENST00000384014 113 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.540-201ENST00000384638 111 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 Y_RNA.590-201ENST00000410140 107 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-613P-201ENST00000410412 108 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU2-55P-201ENST00000411146 174 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 AC087499.4-201ENST00000448505 178 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD127-201ENST00000458892 86 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 PDCD5P2-201ENST00000507570 312 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNA5SP436-201ENST00000516020 115 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-693P-201ENST00000516134 107 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 SCARNA15.1-201ENST00000516384 125 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 RNU6-365P-201ENST00000517113 106 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-34-201ENST00000362441 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-12-201ENST00000362583 82 ntBASIC0.78□□□□□ -2.28
NEDD8-MDP1E9PL57 SNORD115-29-201ENST00000362834 82 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms