Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 RNU6-958P-201ENST00000516995 106 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
SHISA3A0PJX4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 SNORA22.1-201ENST00000362701 134 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 RNU4-36P-201ENST00000364294 144 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 RNU6-360P-201ENST00000390944 104 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 SNORA26.6-201ENST00000391256 115 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AL139132.1-201ENST00000431587 344 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC113410.1-201ENST00000505029 247 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC141557.1-201ENST00000540982 400 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 MIR3618-201ENST00000580330 88 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 MIR548AR-201ENST00000582191 57 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC243994.1-201ENST00000618627 109 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC006386.2-201ENST00000624491 75 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC012005.1-201ENST00000624575 75 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 AC095038.3-201ENST00000634439 195 ntBASIC2.27□□□□□ -2.05
SHISA3A0PJX4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.27□□□□□ -2.05
SHISA3A0PJX4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 AL138827.1-201ENST00000402666 306 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 RPS12P2-201ENST00000439728 269 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 AC079600.2-201ENST00000550076 130 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 FAM71BP1-201ENST00000604431 523 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 AL020996.3-201ENST00000606617 222 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 MIR7106-201ENST00000612419 65 ntBASIC2.26□□□□□ -2.05
SHISA3A0PJX4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SHISA3A0PJX4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 SNORA44-201ENST00000384584 132 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 SNORD77B-201ENST00000391112 67 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 SNORA19.1-201ENST00000410656 129 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 EIF4BP1-201ENST00000554881 351 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 MIR5092-201ENST00000583139 88 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 MIR4791-201ENST00000607666 84 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 MIR6717-201ENST00000622747 73 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 AL137790.1-201ENST00000634283 177 ntBASIC2.25□□□□□ -2.05
SHISA3A0PJX4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHISA3A0PJX4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHISA3A0PJX4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RNU6-363P-201ENST00000362895 105 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 SNORD28B-201ENST00000390993 75 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 MTATP8P2-201ENST00000435212 202 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RNU6-109P-201ENST00000516364 107 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RNU6-184P-201ENST00000516514 107 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RNU7-43P-201ENST00000516554 64 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 SNORA74.3-201ENST00000517108 154 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 DEFB131E-201ENST00000532329 154 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 MIR4694-201ENST00000578534 80 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 RPL12P50-201ENST00000603116 116 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 MIR203B-201ENST00000636080 86 ntBASIC2.24□□□□□ -2.05
SHISA3A0PJX4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHISA3A0PJX4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SHISA3A0PJX4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNY3P2-201ENST00000362918 102 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNU4-67P-201ENST00000364569 141 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNU6-294P-201ENST00000364999 102 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNU6-409P-201ENST00000384114 104 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNA5SP21-201ENST00000410917 96 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.23□□□□□ -2.05
SHISA3A0PJX4 snoU13.16-201ENST00000459350 104 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNA5SP33-201ENST00000516687 98 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 SNORA31.17-201ENST00000516953 127 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 FAM106DP-201ENST00000586416 501 ntBASIC2.23□□□□□ -2.05
SHISA3A0PJX4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHISA3A0PJX4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHISA3A0PJX4 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 RNU6-1131P-201ENST00000364955 107 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 Y_RNA.558-201ENST00000384685 113 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 RNU6-733P-201ENST00000410759 104 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 SCARNA23-201ENST00000516060 130 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 RNU7-193P-201ENST00000516723 65 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 SNORA31.15-201ENST00000516771 132 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
SHISA3A0PJX4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHISA3A0PJX4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.220-201ENST00000364244 109 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 RNU6-913P-201ENST00000390913 95 ntBASIC2.21□□□□□ -2.06
SHISA3A0PJX4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms