Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-42P-201ENST00000384165 107 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RNA5SP496-201ENST00000391240 109 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RPS3AP1-201ENST00000413190 320 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 AC113618.1-201ENST00000416747 285 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 AC005534.2-201ENST00000431047 433 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 SERF1AP1-201ENST00000514575 187 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RNA5SP220-201ENST00000516298 104 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 DEFB108E-201ENST00000524692 240 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 AC006006.1-201ENST00000603082 144 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 RNU6-94P-201ENST00000607728 107 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
ATG4BQ9Y4P1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-654P-201ENST00000364373 107 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 SNORA1.2-201ENST00000365189 134 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 MIR548O-201ENST00000408583 114 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNA5SP95-201ENST00000410319 137 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNU4-57P-201ENST00000515980 135 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 MIR4791-201ENST00000607666 84 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 MIR6516-201ENST00000630554 81 ntBASIC0.77□□□□□ -2.29
ATG4BQ9Y4P1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 SNORA2B-201ENST00000384583 137 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 MIR548J-201ENST00000408833 112 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 MIR1302-7-201ENST00000408841 72 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 SCARNA8-201ENST00000515924 131 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 AL021707.8-201ENST00000609428 183 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 MIR6734-201ENST00000621166 68 ntBASIC0.76□□□□□ -2.29
ATG4BQ9Y4P1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.11-201ENST00000362375 109 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1227P-201ENST00000383981 107 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1289P-201ENST00000384431 106 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-713P-201ENST00000384761 107 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AL392103.1-201ENST00000447000 198 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC036111.3-201ENST00000526389 112 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 MIR548AO-201ENST00000579992 96 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 RMST_2.1-201ENST00000617263 136 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC243994.1-201ENST00000618627 109 ntBASIC0.75□□□□□ -2.29
ATG4BQ9Y4P1 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-238P-201ENST00000363313 106 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-211P-201ENST00000384047 107 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-847P-201ENST00000411115 108 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 AC067940.1-201ENST00000458411 300 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 MTATP8P1-201ENST00000467115 207 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 TRBVB-201ENST00000477100 408 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 7SK.10-201ENST00000621414 298 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 MTND1P7-201ENST00000632801 297 ntBASIC0.74□□□□□ -2.29
ATG4BQ9Y4P1 UBE2WP1-201ENST00000362030 340 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-396P-201ENST00000365369 105 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1109P-201ENST00000391187 107 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 SNORD111-201ENST00000408139 94 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 AC107297.1-201ENST00000459991 176 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 AC113410.1-201ENST00000505029 247 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 SNORD77.4-201ENST00000516158 81 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-635P-201ENST00000516651 102 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms