Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-804P-201ENST00000384286 107 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 SNORA79-201ENST00000408376 140 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-365P-201ENST00000517113 106 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 AC068338.1-201ENST00000565567 176 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 RNU4-84P-201ENST00000364200 139 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-60P-201ENST00000364792 103 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 SNORD61-201ENST00000384252 73 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 MIR516B2-201ENST00000385190 85 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 AC021753.1-201ENST00000635724 168 ntBASIC1.48□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 MIR526A1-201ENST00000384897 85 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 SNORA67.5-201ENST00000391036 107 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-394P-201ENST00000410735 107 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 AC015922.2-201ENST00000435593 184 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 RNA5SP153-201ENST00000516498 76 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 RNU7-25P-201ENST00000516544 62 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 AC090142.3-201ENST00000519012 385 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 MIR378D2-201ENST00000580636 98 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 AP000942.3-201ENST00000603702 160 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 AC006441.5-201ENST00000612680 209 ntBASIC1.47□□□□□ -2.17
SMARCAL1Q9NZC9 RNU6-818P-201ENST00000364837 108 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 RNA5SP259-201ENST00000365541 109 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR548A2-201ENST00000384956 97 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR513A1-201ENST00000385138 129 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR548O-201ENST00000408583 114 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 AC107027.2-201ENST00000512197 115 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-693P-201ENST00000516134 107 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 AC007751.1-201ENST00000529260 376 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR3144-201ENST00000579460 79 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 AC097639.2-201ENST00000603159 172 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 AC015726.2-201ENST00000620112 122 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 MIR3658-201ENST00000636291 56 ntBASIC1.46□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.398-201ENST00000383952 99 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 SNORA1-201ENST00000384107 130 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.521-201ENST00000384560 114 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-768P-201ENST00000384683 107 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-239P-201ENST00000390990 99 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 SNORA26-201ENST00000391286 122 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 AC005840.1-201ENST00000498412 377 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-917P-201ENST00000516294 104 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-504P-201ENST00000516568 104 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-126P-201ENST00000516685 103 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-255P-201ENST00000516957 105 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 MTND5P41-201ENST00000517498 206 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 AL160236.1-201ENST00000556317 195 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
SMARCAL1Q9NZC9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-199P-201ENST00000362954 107 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD116-18-201ENST00000383961 92 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.464-201ENST00000384282 110 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD38C-201ENST00000384381 69 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 MIR518F-201ENST00000384973 87 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 MIR452-201ENST00000385020 85 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-888P-201ENST00000363010 101 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-978P-201ENST00000364371 103 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD24-201ENST00000383884 75 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 AC092991.1-201ENST00000477176 376 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD116-25-201ENST00000516517 92 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 RNU7-121P-201ENST00000516604 62 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 MIR3129-201ENST00000581095 76 ntBASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.43□□□□□ -2.18
SMARCAL1Q9NZC9 Y_RNA.170-201ENST00000363746 110 ntBASIC1.42□□□□□ -2.18
SMARCAL1Q9NZC9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SMARCAL1Q9NZC9 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
SMARCAL1Q9NZC9 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-151P-201ENST00000364158 107 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
SMARCAL1Q9NZC9 RNU6-1062P-201ENST00000383908 107 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms