Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 AL451046.2-201ENST00000403074 277 ntBASIC1.9□□□□□ -2.11
CCDC8Q9H0W5 RNU2-70P-201ENST00000410718 179 ntBASIC1.9□□□□□ -2.11
CCDC8Q9H0W5 AP002392.1-201ENST00000537692 208 ntBASIC1.9□□□□□ -2.11
CCDC8Q9H0W5 MIR4781-201ENST00000585250 76 ntBASIC1.9□□□□□ -2.11
CCDC8Q9H0W5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 SNORD45.3-201ENST00000363836 72 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 RNU6-60P-201ENST00000364792 103 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 RNU6-321P-201ENST00000410912 106 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 BTF3P4-201ENST00000418852 495 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 SNRPGP13-201ENST00000442212 177 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 AL121914.1-201ENST00000450188 156 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 RNU6-902P-201ENST00000517212 91 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
CCDC8Q9H0W5 RNU6-47P-201ENST00000383866 107 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 RNU4-62P-201ENST00000410125 130 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 AC092991.1-201ENST00000477176 376 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 AC005840.1-201ENST00000498412 377 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 RNU6-917P-201ENST00000516294 104 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 FAM106DP-201ENST00000586416 501 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 AC090425.1-201ENST00000610007 140 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC8Q9H0W5 RNU6-888P-201ENST00000363010 101 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 MIR526A1-201ENST00000384897 85 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 MIR3937-201ENST00000580135 106 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 AC004792.1-201ENST00000614523 137 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 U6.106-201ENST00000636360 105 ntBASIC1.87□□□□□ -2.11
CCDC8Q9H0W5 SNORA1.2-201ENST00000365189 134 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AC087499.4-201ENST00000448505 178 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 MIR4431-201ENST00000579990 94 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AL365434.2-201ENST00000607979 234 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AL512598.1-201ENST00000610158 273 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
CCDC8Q9H0W5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 RNU2-64P-201ENST00000411315 191 ntBASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 SNORA74.3-201ENST00000517108 154 ntBASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC8Q9H0W5 Y_RNA.240-201ENST00000364469 95 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 Y_RNA.412-201ENST00000384001 104 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 RNU7-43P-201ENST00000516554 64 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 MIR3668-201ENST00000582138 75 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 AL121890.5-201ENST00000620848 304 ntBASIC1.84□□□□□ -2.11
CCDC8Q9H0W5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.542-201ENST00000384641 111 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 MIR1287-201ENST00000408492 90 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 MIR548O-201ENST00000408583 114 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 MIR378D2-201ENST00000580636 98 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 AC134878.1-201ENST00000619901 243 ntBASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC8Q9H0W5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 RNU6-643P-201ENST00000384018 107 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 MIR516B2-201ENST00000385190 85 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 MTND5P15-201ENST00000434246 349 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 RNU6-693P-201ENST00000516134 107 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 RNU6-561P-201ENST00000516222 102 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 SNORD116-25-201ENST00000516517 92 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 MIR3664-201ENST00000579074 99 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 AC098479.1-201ENST00000609225 154 ntBASIC1.82□□□□□ -2.12
CCDC8Q9H0W5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 SNORD115-28-201ENST00000363931 81 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.410-201ENST00000383992 113 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 SNORD61-201ENST00000384252 73 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 SNORD41-201ENST00000386967 70 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 U8.17-201ENST00000391292 132 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 SNORD123-201ENST00000459473 70 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 TRMT112P2-201ENST00000512910 132 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 RNU4-57P-201ENST00000515980 135 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.662-201ENST00000516028 97 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 AC015726.2-201ENST00000620112 122 ntBASIC1.81□□□□□ -2.12
CCDC8Q9H0W5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.8□□□□□ -2.12
CCDC8Q9H0W5 RPL39P39-201ENST00000455840 151 ntBASIC1.8□□□□□ -2.12
CCDC8Q9H0W5 AC107297.1-201ENST00000459991 176 ntBASIC1.8□□□□□ -2.12
CCDC8Q9H0W5 AC023790.1-201ENST00000482174 347 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 381.7 ms