Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC109810.1-201ENST00000534066 224 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 AC012433.1-201ENST00000588916 398 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 AP000942.3-201ENST00000603702 160 ntBASIC1.05□□□□□ -2.24
CMTM3Q96MX0 SNORD24-201ENST00000383884 75 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.04□□□□□ -2.24
CMTM3Q96MX0 AC087499.4-201ENST00000448505 178 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.04□□□□□ -2.24
CMTM3Q96MX0 RNU6-693P-201ENST00000516134 107 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 AL645939.4-201ENST00000604495 135 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 AC243994.1-201ENST00000618627 109 ntBASIC1.04□□□□□ -2.24
CMTM3Q96MX0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.04□□□□□ -2.24
CMTM3Q96MX0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CMTM3Q96MX0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CMTM3Q96MX0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.133-201ENST00000363428 110 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SNORD115-28-201ENST00000363931 81 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SNORA26-201ENST00000391286 122 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 MTND2P23-201ENST00000422990 651 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SNORD127-201ENST00000458892 86 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 RNU6-1299P-201ENST00000516316 100 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 SCARNA15.1-201ENST00000516384 125 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 AL365265.1-201ENST00000621045 234 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 MTND1P7-201ENST00000632801 297 ntBASIC1.03□□□□□ -2.24
CMTM3Q96MX0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
CMTM3Q96MX0 SNORD115-34-201ENST00000362441 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-12-201ENST00000362583 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-29-201ENST00000362834 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-9-201ENST00000362912 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-21-201ENST00000362963 81 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-14-201ENST00000363090 81 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-13-201ENST00000363358 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-41-201ENST00000363608 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-11-201ENST00000363616 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-5-201ENST00000363633 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.162-201ENST00000363683 102 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-39-201ENST00000363694 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-4-201ENST00000363810 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-16-201ENST00000363887 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-6-201ENST00000363942 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-42-201ENST00000364273 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-15-201ENST00000364809 81 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-1-201ENST00000364961 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-26-201ENST00000365067 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-10-201ENST00000365073 81 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-43-201ENST00000365503 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-36-201ENST00000365629 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD61-201ENST00000384252 73 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 MIR616-201ENST00000385293 97 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 MIR764-201ENST00000390811 85 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CMTM3Q96MX0 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 RNU6-1045P-201ENST00000516321 107 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 RNU6-504P-201ENST00000516568 104 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 MIR4643-201ENST00000577473 78 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 AC131055.1-201ENST00000584626 316 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 SNORD115-40-201ENST00000606510 82 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 MIR6516-201ENST00000630554 81 ntBASIC1.02□□□□□ -2.25
CMTM3Q96MX0 snoU2_19.4-201ENST00000364329 80 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 MT-TT-201ENST00000387460 66 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 MTCYBP9-201ENST00000431021 303 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 RNA5SP153-201ENST00000516498 76 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.01□□□□□ -2.25
CMTM3Q96MX0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 AC023827.1-201ENST00000569247 97 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 MIR4303-201ENST00000581299 66 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
CMTM3Q96MX0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.01□□□□□ -2.25
CMTM3Q96MX0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CMTM3Q96MX0 MIR378A-201ENST00000362177 66 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.37-201ENST00000362606 108 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.54-201ENST00000362766 105 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-888P-201ENST00000363010 101 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.277-201ENST00000364754 102 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.416-201ENST00000384014 113 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-484P-201ENST00000384016 107 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 SNORA24-201ENST00000384096 131 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MIR518F-201ENST00000384973 87 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-1228P-201ENST00000391014 107 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MIR942-201ENST00000401111 86 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MIR548H3-201ENST00000408771 118 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU2-38P-201ENST00000410856 79 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 SNRPGP8-201ENST00000454064 226 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms